Different x-axis scales using c() in latticeExtra

latticeExtra's c() can not combine logarithmic with linear x scales,
I'm afraid.  I would recommend displaying each separate plot on one
page using plot.trellis() or the gridExtra function that John Kane
mentioned.

Cheers
Felix


On 21 July 2013 02:50, David Winsemius <dwinsemius at comcast.net> wrote:

On Jul 19, 2013, at 8:18 PM, Jeff Stevens wrote:

Hi,

I would like to combine multiple xyplots into a single, multipanel
display.  Using R 3.0.1 in Ubuntu, I have used c() from latticeExtra
to combine three plots, but the x-axis for two plots are on a log
scale and the other is on a normal scale.  I also have included
equispace.log=FALSE to clean up the tick labels.  However, when I try
all of these, the x-axis scale of the first panel is used for all
three.  How do I keep different scales for the different panels?

Here is an example:
library(lattice)
library(latticeExtra)
response <- c(76, 14, 15, 44, 26, 19, 74, 123, 49, 8, 56, 17, 18)
predictor1 <- c(107, 7, 25, 501, 64, 88, 344, 367, 379, 10, 66, 31, 32)
predictor2 <- c(10, 9, 8, 10, 29, 27, 55, 48, 2, 6, 14, 10, 5)
predictor3 <- c(67, 22, 66, 41, 72, 64, 69, 63, 64, 70, 60, 75, 78)

pred1_plot <- xyplot(response ~ predictor1, scales = list(log = TRUE,
equispaced.log = FALSE),
 panel = function(x, y, ...) {
   panel.xyplot(x, y, type = c("p", "r"), cex = 2)
   panel.text(x = log10(8), y = log10(120), labels = "(a)")
 }
)

pred2_plot <- xyplot(response ~ predictor2, scales = list(log = TRUE,
equispaced.log = FALSE),
 panel = function(x, y, ...) {
   panel.xyplot(x, y, type = c("p", "r"), cex = 2)
   panel.text(x = log10(2), y = log10(120), labels = "(b)")
 }
)

pred3_plot <- xyplot(response ~ predictor3, scales = list(y = list(log
= TRUE, equispaced.log = FALSE)),
 panel = function(x, y, ...) {
   panel.xyplot(x, y, type = c("p", "r"), cex = 2)
   panel.text(x = 22, y = log10(120), labels = "(c)")
 }
)

all_plots <- c(pred1_plot, pred2_plot, pred3_plot, layout = c(3, 1), x.same = F)
update(all_plots, xlab=c("Predictor 1","Predictor 2", "Predictor 3"),
scales = list(y=list(log=T, equispaced.log=FALSE), x = c(list(log=T,
equispaced.log=FALSE), list(log=T, equispaced.log=FALSE),
list(log=F))))

update(all_plots, xlab=c("Predictor 1","Predictor 2", "Predictor 3"),
scales = c(list(log = TRUE, equispaced.log = FALSE), list(log = TRUE,
equispaced.log = FALSE), list(y=list(log=T, equispaced.log = FALSE))))

Any help is appreciated!

I assume there was a notice o your console that there were warnings, right? You should offer the full texts of warnings and error messages. Here the full text of the first and second warnings:

warnings()[1:2]

$`log scales cannot be changed via 'update'`
update.trellis(all_plots, xlab = c("Predictor 1", "Predictor 2",
    "Predictor 3"), scales = c(list(log = TRUE, equispaced.log = FALSE),
    list(log = TRUE, equispaced.log = FALSE), list(y = list(log = T,
        equispaced.log = FALSE))))
$`'x' is NULL so the result will be NULL`
rep(scales[[nm]], length.out = 2)

The first one is telling you why the results should be different than you expect. I'm not entirely sure what the second one is telling you, but it doesn't sound good.

--
David Winsemius
Alameda, CA, USA

--
Felix Andrews / ???
http://www.neurofractal.org/felix/