lme help
Please read the posting 1) I think BioConductor mailing list might be better as some of these could be implemented via LIMMA (I believe) 2) Provide sufficient information and perhaps a simple example. Regards, Adai
On Wed, 2006-02-08 at 10:42 +0100, Mahdi Osman wrote:
Hi list, I am fitting microarray data (intensity) model using the lme package in R environment. I have 5 fixed variables in the model. One of the fixed variables is genes. I am trying to get p-values for different genes. But I am getting only one p-value for all genes together. I can get a list of p-value when I run lm. Why can't this work in lme? My aim is to do multiple comaprison of all the genes that I have and I can only do this if I have a list of their p-vales I was wondering if you can help me solve this problem. That is getting a list of p-value for each gene in the model using the lme. Thanks in advance for your help Regards Mahdi