intercept value in lme
Thanks to all of you! Yes, you're right - I didn't take into consideration the ranges of predicors which are quite large. I think the matter over and realize that my assumption that something have to be wrong doesn't have in fact any reason except "strange" look of the value. Centering helped (as suggested by Chuck) especially in interpretation and helped me to understand what is really going on in the model. Thank you once again - these are my first experiences with R as like as with multilevel models, so... thank you for your patience! Best regards, victor
Chuck Cleland wrote:
victor wrote:
It is boundend, you're right. In fact it is -25<=X<=0 These are cross-national survey data (I was investigated 7 countries in each country there was 900-1700 cases). In fact, there was two level 2 variables, so: m1<-lme(X~Y,~1|group,data=data,na.action=na.exclude,method="ML") m2<-lme(X~Y+Z1+Z2,~1|group,data=data,na.action=na.exclude,method="ML") X is a life satisfaction factor combined from 2 other variables for each case separately, of course. Y - income per capita in household Z1 - unemployment rate in a country. Z2 - life expectancy in a country group - country
Victor: What happens if you center Y, Z1, and Z2 so that 0 corresponds to the mean for each? As it is, zero is a very unusual value for each of these variables. Do you really want to estimate the value of X when income = 0, unemployment = 0, and life expectancy = 0? If I understand correctly, I think that's why the intercept value looks unusual to you.
I attach a similar model where after adding Lev2 predictors intercept
value is even 22!
I'm sure there is my mistake somwhere but... what is wrong?
Linear mixed-effects model fit by maximum likelihood
Data: data
AIC BIC logLik
31140.77 31167.54 -15566.39
Random effects:
Formula: ~1 | country
(Intercept) Residual
StdDev: 0.8698037 3.300206
Fixed effects: X ~ Y
Value Std.Error DF t-value p-value
(Intercept) -4.397051 0.3345368 5944 -13.143698 0
Y -0.000438 0.0000521 5944 -8.399448 0
Correlation:
(Intr)
Y -0.13
Standardized Within-Group Residuals:
Min Q1 Med Q3 Max
-6.3855881 -0.5223116 0.2948941 0.6250717 2.6020180
Number of Observations: 5952
Number of Groups: 7
and for the second model:
Linear mixed-effects model fit by maximum likelihood
Data: data
AIC BIC logLik
31133.08 31173.23 -15560.54
Random effects:
Formula: ~1 | country
(Intercept) Residual
StdDev: 0.3631184 3.300201
Fixed effects: X ~ Y + Z1 + Z2
Value Std.Error DF t-value p-value
(Intercept) 22.188828 4.912214 5944 4.517073 0.0000
Y -0.000440 0.000052 5944 -8.456196 0.0000
Z1 -0.095532 0.037520 4 -2.546161 0.0636
Z2 -0.333549 0.062031 4 -5.377127 0.0058
Correlation:
(Intr) FAMPEC UNEMP
Y 0.168
Z1 -0.429 0.080
Z2 -0.997 -0.188 0.366
Standardized Within-Group Residuals:
Min Q1 Med Q3 Max
-6.3778888 -0.5291287 0.2963226 0.6260023 2.6226880
Number of Observations: 5952
Number of Groups: 7
Doran, Harold wrote:
As Andrew noted, you need to provide more information. But, what I see is that your model assumes X is continuous but you say it is bounded, -25 < X < 0
-----Original Message----- From: r-help-bounces at stat.math.ethz.ch [mailto:r-help-bounces at stat.math.ethz.ch] On Behalf Of victor Sent: Wednesday, December 06, 2006 3:34 AM To: r-help at stat.math.ethz.ch Subject: [R] intercept value in lme Dear all, I've got a problem in fitting multilevel model in lme. I don't know to much about that but suspect that something is wrong with my model. I'm trying to fit: m1<-lme(X~Y,~1|group,data=data,na.action=na.exclude,method="ML") m2<-lme(X~Y+Z,~1|group,data=data,na.action=na.exclude,method="ML") where: X - dependent var. measured on a scale ranging from -25 to 0 Y - level 1 variable Z - level 1 variable In m1 the intercept value is equal -3, in m2 (that is after adding Lev 2 var.) is equal +16. What can be wrong with my variables? Is this possible that intercept value exceeds scale? Best regards, victor
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______________________________________________ R-help at stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.