Error in read.table(file = file, header = header, sep = sep, quote = quote, : more columns than column names
What is initialCuratedDF? I'm not seeing it in any standard location so there's no way to debug it... Also see inline. Michael
On Tue, Feb 28, 2012 at 2:41 PM, Ben Ganzfried <ben.ganzfried at gmail.com> wrote:
Hey, I just googled my error and many things came up. ?I followed the leads and read the ?read.delim page; I tried changing header = TRUE, and row.names = TRUE-- but I've still been having trouble fixing it, so I would greatly appreciate any help you can provide. ?Here is my code:
PLEASE don't ever do this -- it's potentially very destructive to anyone who tries to copy your script to help you. David also mentioned this when you posted the same code ~ 6 months ago.
## rm(list=ls()) ## ALWAYS WRAP IN COMMENTS IF YOU ARE GOING TO INSIST ON INCLUDING IT
source("../../functions.R")
uncurated <- read.csv("../uncurated/GSE3141_full_pdata.csv", as.is
=TRUE,row.names=1)
celfile.dir <- "../../../DATA/GSE3141/RAW"
##initial creation of curated dataframe
curated <- initialCuratedDF(rownames(uncurated),
template.filename="template.csv")
The error occurs when I run this line:
curated <- initialCuratedDF(rownames(uncurated),
template.filename="template.csv") Error in read.table(file = file, header = header, sep = sep, quote = quote, ?: ?more columns than column name I would greatly appreciate any help. Thanks! Ben ? ? ? ?[[alternative HTML version deleted]]
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