"Missing links": Hmisc and Design docs
On 24 Apr 2003 11:43:51 +0200
Peter Dalgaard BSA <p.dalgaard at biostat.ku.dk> wrote:
(Ted Harding) <Ted.Harding at nessie.mcc.ac.uk> writes:
Hi folks, Using R Version 1.6.2 (2003-01-10) on SuSE Linux 7.2, I just installed Hmisc_1.5-3.tar.gz and Design_1.1-5.tar.gz These were taken from http://hesweb1.med.virginia.edu/biostat/s/library/r Checked the dependencies: Hmisc: grid, lattice, mva, acepack -- all already installed Design: Hmisc, survival -- survival already installed, so installed Hmisc first All seems to go well till the "help" docs are compiled, whereupon I get several reports of "missing links", as below (where I omit cases with no such reports). I can't recall seeing "missing links" when installing other libraries. Two questions: 1. Have I overlooked something here, which I should have done? 2. Do these "missing links" matter? Or is this simply a manifestation of Frank Harrell's comment, on the above site, that "I still have not had time to fix details in the documentation that will allow R CMD check to be passed, which would allow me to submit the libraries to CRAN."
In general, you get the missing links if there's a reference to something that isn't there. Sometimes, it means that you need to install some other package before this one (e.g. with the set of recommended packages that ship with R we need to build survival before boot), but in Frank's case, I think a fair proportion of them are due to S-PLUS references that he hasn't quite ferreted out yet. Certainly, trellis and nlminb are S-PLUS items that are not in R (it might actually be an idea to have help pages that said "foo is an S-PLUS function that is not in R, you probably want to use bar instead"; anyone want to contribute?)
Peter is correct. I wish there were a way to give R a file containing a list of function names whose links are to be ignored. Then when I convert the Rd file for S-Plus I could still have one base source file. -Frank --- Frank E Harrell Jr Prof. of Biostatistics & Statistics Div. of Biostatistics & Epidem. Dept. of Health Evaluation Sciences U. Virginia School of Medicine http://hesweb1.med.virginia.edu/biostat