Message-ID: <CANVWkqeMXx4Cd0CuMt4ua5etiHY5_K3noWmscTp2gNqwPAAHZA@mail.gmail.com>
Date: 2020-09-02T11:12:04Z
From: Dr Priyanka Jain
Subject: Error in running diffcoexp
In-Reply-To: <CANVWkqevFHYiLauYZV0cars+HmVjra-TUc9kK+n=NjdE2u-qMw@mail.gmail.com>
Dear Sir/ Madam,
I am getting the following error:
geneExp <- read.table("DV_control_FPKM.txt",header=T, sep="\t",row.names=1)
geneExp=as.matrix(as.data.frame(geneExp))
head(geneExp)
geneExp2 <- read.table("DV_introgressed_line_FPKM.txt",header=T,
sep="\t",row.names=1)
geneExp2=as.matrix(as.data.frame(geneExp))
head(geneExp2)
library(diffcoexp)
allowWGCNAThreads()
res=diffcoexp(exprs.1 = geneExp, exprs.2 = geneExp2, r.method = "spearman" )
Error in exprs.1[rownames(exprs.1) != "", ] :
incorrect number of dimensions
I have attached my input file along with mail
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With Regards,
*Dr Priyanka Jain (PhD)*,
Mobile : 9718854136
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With Regards,
*Dr Priyanka Jain (PhD)*,
Mobile : 9718854136