sweave tables as images?
Normally I hate the device()+code+dev.off()+cat('\\includegraphics{})
trick. Let me show you how trivial this can be in knitr:
https://gist.github.com/2790922
This example shows the real source code to the reader
(device()+dev.off() makes no sense to them), and leaves all the dirty
tricks behind the scene.
That being said, Sweave can be regarded as a subset of knitr, so if
you really want to play the old trick, you still can do it in knitr.
Regards,
Yihui
--
Yihui Xie <xieyihui at gmail.com>
Phone: 515-294-2465 Web: http://yihui.name
Department of Statistics, Iowa State University
2215 Snedecor Hall, Ames, IA
On Fri, May 25, 2012 at 5:01 PM, baptiste auguie
<baptiste.auguie at googlemail.com> wrote:
My guess is that it would be impossible to use the table size in
Sweave, only mildly non-trivial in knitr with a proper hook. The
easiest hack in either of them would be to manually open the png
device, and use cat() with \includegraphics{} where you want the plot
diplayed.
HTH,
b.
On 26 May 2012 09:43, Alexander Shenkin <ashenkin at ufl.edu> wrote:
this works - thanks baptiste! ?i'm working in Sweave right now - perhaps it will be tough in knitr as you mention. On 5/25/2012 4:31 PM, baptiste auguie wrote:
you can open a device that has the exact dimensions of the table,
g = tableGrob(head(iris, 4))
png("test.png", width=convertWidth(grobWidth(g), "in", value=TRUE),
? ? ? ? height=convertHeight(grobHeight(g), "in",
value=TRUE),units="in", res=150)
grid.draw(g)
dev.off()
Doing this with knitr might be tricky though, since the unit
conversion opens a blank device window, and you'd want to define some
hook instead of manually creating the png file.
I have another version of grid.table where you can specify the width
and height manually [*], e.g to span the full window, but it's not
necessarily a desirable thing (the spacing between rows and columns
can become too large).
HTH,
baptiste
[*] experimental code at https://gist.github.com/2013903
On 26 May 2012 09:16, Alexander Shenkin <ashenkin at ufl.edu> wrote:
Thanks Yihui, That's a great idea, and comes close to the mark, except that I have to use png's in order to "Insert & Link" them as pictures in Word (and hence make the doc both shareable and update when new figures are generated). thanks, allie On 5/25/2012 2:57 PM, Yihui Xie wrote:
You may take a look at knitr's graphics manual which tells you how you can automatically crop the white margins: https://github.com/downloads/yihui/knitr/knitr-graphics.pdf ("Cropping PDF Graphics"). I'm not sure if pdfcrop works in this case, though. Regards, Yihui -- Yihui Xie <xieyihui at gmail.com> Phone: 515-294-2465 Web: http://yihui.name Department of Statistics, Iowa State University 2215 Snedecor Hall, Ames, IA On Fri, May 25, 2012 at 2:44 PM, Alexander Shenkin <ashenkin at ufl.edu> wrote:
grid.table() works well, but using it in sweave creates graphics with very wide margins. ?I'm sure this has something to do with grid, and not just grid.table. ?Any idea how I can clip the graphic to the edges of the table graphic? ?I've looked into viewports, etc, but I can't seem to find anything that will clip a graphic to its edges, perhaps with some defined margin. any help greatly appreciated! thanks, allie
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