Message-ID: <204337BB-AB89-45C2-8831-6B90E6292371@comcast.net>
Date: 2017-09-18T19:00:21Z
From: David Winsemius
Subject: pheatmap: incomplete figure
In-Reply-To: <131866721.1747055.1505752014804@mail.yahoo.com>
> On Sep 18, 2017, at 9:26 AM, Fix Ace via R-help <r-help at r-project.org> wrote:
>
> Dear R Community,
> I tried to generate heatmap for a matrix of 1500 columns by 106 rows using the following R script:
>> pheatmap(tf.vs.DE.1.removeAllZeroCol, fontsize=3,border_color=NA)
> and got the graph (as attached Fig 1)
>
> Since the column labels appear very crowded, I tried to increase the cellwidth to stretch the graph horizontally. The idea was to show the graph section by section, but with clear/readable column labels (not overlapped labels).
> So I typed:
>> pheatmap(tf.vs.DE.1.removeAllZeroCol, fontsize=3,cellwidth=3,cellheight=3,border_color=NA)
> However, this time I only got middle part of the original heatmap (as attached Fig 2)
> I wonder if there is way I could output the whole graph after such horizontal stretch. If not, how do I get the left end of the graph.
>
Why not define a graphics device that is wider?
--
David Winsemius
Alameda, CA, USA
'Any technology distinguishable from magic is insufficiently advanced.' -Gehm's Corollary to Clarke's Third Law