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Which version of R is this?  From the BUGS section in NEWS for R 2.9.0 
patched:

     o	median.default() was altered in 2.8.1 to use sum() rather
 	than mean(), although it was still documented to use mean().
 	This caused problems for POSIXt objects, for which mean() but
 	not sum() makes sense, so the change has been reverted.

So this was a bug, but it has already been fixed (see the comments in 
the posting guide and especially the FAQ about checking if things have 
already been changed).
On Fri, 29 May 2009, Zheng, Xin (NIH) [C] wrote: