Biomod model access
I have been struggling with this same problem. I always have to re-run. PLEASE HELP!! I have however figured out the whole data-format issue & am now able to save grid files for use in other GIS programs after they are re-exported.
On Thursday, August 15, 2013 1:32:31 AM UTC-7, Jenny Williams wrote:
I am still trying to get my head around biomod2. I have run through the tutorial a few times, which works really well in a linear format. But, I want to see the models and assess them at every part of the process. So, I need to: 1: be able to re-access all the files from /.BIOMOD_DATA/ once R is closed and all the file links are lost. e.g myBiomodModelOut 2: call the summary parameters for the models e.g GLM, I can see the files but not sure how to access them. e.g
myGLMs <- BIOMOD_LoadModels(myBiomodModelOut, models='GLM')
#just produces a list
summary(myGLMs[1])
Length Class Mode 1 character character #summary(GLM) doesn't work, but is the output that I am looking to find. 3. find the split datasets used for each of the iterations BIOMOD_Modeling options; NbRunEval for DataSplit Any help or pointers in the right direction would be greatly appreciated. FYI the vignette does not seem to work: http://127.0.0.1:15505/library/biomod2/doc/index.html ****************** Jenny Williams Spatial Information Scientist, GIS Unit Herbarium, Library, Art & Archives Directorate Royal Botanic Gardens, Kew Richmond, TW9 3AB, UK Tel: +44 (0)208 332 5277 email: jenny.w... at kew.org <javascript:><mailto:jenny.williams at kew.org<javascript:>> ****************** Film: The Forgotten Home of Coffee - Beyond the Gardens< http://www.youtube.com/watch?v=-uDtytKMKpA&sns=tw> Stories: Coffee Expedition - Ethiopia< http://storify.com/KewGIS/coffee-expedition-ethiopia> Kew in Harapan Rainforest Sumatra< http://storify.com/KewGIS/kew-in-harapan-rainforest> Articles: Seeing the wood for the trees< http://www.kew.org/ucm/groups/public/documents/document/kppcont_060602.pdf> How Kew's GIS team and South East Asia botanists are working to help conserve and restore a rainforest in Sumatra. Download a pdf of this article here.< http://www.kew.org/ucm/groups/public/documents/document/kppcont_060602.pdf>
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