[BioC] MatLab SimBiology
The differential equations solvers (LSODA, etc.) used in Matlab are all available in R. You may need to set-up the equations yourself, from a format such as SBML. The capability is all there in R - maybe just not as nicely packaged and pre-digested as Matlab. If you access to programming resources, choose R. Regards, - Sanjay
mauede at alice.it wrote:
Is there any R package that implements the same capability of MatLab toolbox called SimBiology ? We are expecially interested in protein-protein interactions and network analysis. As far as I know SimBiology implements a system of ODEs reflecting the kinetic chemical reactions. We would be more interested in stochastic simulations. Thank you in advance. Maura tutti i telefonini TIM! [[alternative HTML version deleted]]
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