About Pearson correlation functions
Thanks. It seems that the differences I saw in some of my data points were related to the number of digits and rounding. Regards, Mahmood
From: Bill Dunlap <williamwdunlap at gmail.com>
Sent: Sunday, May 30, 2021 7:00:52 PM
To: Mahmood Naderan-Tahan
Cc: r-help at r-project.org
Subject: Re: [R] About Pearson correlation functions
Sent: Sunday, May 30, 2021 7:00:52 PM
To: Mahmood Naderan-Tahan
Cc: r-help at r-project.org
Subject: Re: [R] About Pearson correlation functions
You didn't say how the values differed. If one in the plot is a rounded version of the other then adding the ggpur::ggscatter() argument
cor.coeff.args=list(digits=7)
will fix things up.
-Bill
On Sun, May 30, 2021 at 9:18 AM Mahmood Naderan-Tahan <mahmood.naderan at ugent.be<mailto:mahmood.naderan at ugent.be>> wrote:
Hi
Maybe this is not directly related to R, but I appreciate you can help me with an idea. I use the following ggscatter function to plot a Pearson correlation Coefficient and it works fine. In the chart I see both R-value and P-value.
ggscatter(mydata, x = "V1", y = "V2", add = "reg.line", conf.int<http://conf.int> = TRUE, cor.coef = TRUE, cor.method = "pearson")
On the other hand, when I use this command
res <- cor.test(mydata$V1, mydata$V2, method = "pearson")
The R and P values are different from ggscatter.
I would like to know:
1- Why they are different?
2- How to print P and R values of ggscatter on terminal?
Regards,
Mahmood
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