Message-ID: <21149727.post@talk.nabble.com>
Date: 2008-12-23T19:10:34Z
From: iamsilvermember
Subject: Error: cannot allocate vector of size 1.8 Gb
In-Reply-To: <alpine.LFD.2.00.0812230810440.5888@gannet.stats.ox.ac.uk>
>What are you going to do with an agglomerative hierarchical clustering of
22283 objects? It will not be interpretible.
As a matter of fact I was ask to do a clustering analysis on gene
expression. Something
http://www.ncbi.nlm.nih.gov/projects/geo/gds/analyze/analyze.cgi?datadir=UCorrelationUPGMA&ID=GDS3254&myType=0
Like this
>Why? Both will have a 3GB address space limits unless the Xeon box is
64-bit. And this works on my 64-bit Linux boxes.
I am pretty sure the linux server is 64bit.
Sorry I am just a beginner in R. I read the "memory-limit" help you
suggested, but I still cannot find a solution to my problem... May I know
if there is any work around for this issue?
Thank you so much again!
--
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