Knitr R - how to draw plot exactly at place of plot function call in output document?

Hello,

HTML looks much nicer :) ... but still problem is not solved :/ still
having mixed sections and plots.

Thank you for your advice,
Michu

2016-06-06 10:04 GMT+02:00 Ulrik Stervbo <ulrik.stervbo at gmail.com>:

Hi Michu,

What document type do you generate? I usually make just html and have no
problems. If you create a pdf, please remember this is done through LaTeX
and your problem could arise from the floats of LaTeX.

For other output I have no idea.

Hope this helps
Ulrik

Michu Kom <michu.kom at gmail.com> schrieb am Mo., 6. Juni 2016 09:41:

My R script run with Knitr generates a statistic summary of electrode
pairs
accompanied with plots. The problem is that knitr does not render plots
in
correct sections. In section for pair A knitr do not wait for plot and
start to evaluate code for output summary for pair B. So in section B
knitr
places plot from section A among printed output summary for pair B.

My function analizePair calculates some statistics and print them out. I
call a ezPlot function inside analizePair function.

knitr::opts_chunk$set(fig.show = 'asis') # 'hold' option is not proper
for my needs
for(pair in pairsLabels)
    {
        print("----------")
        print("Analysing single pair of electrodes...")
        print("----------")
        print(pair)

        analizePair(pairLabel = pair)

        print("----------")
        print("Analysing pair finished.")
        print("----------")
    }

I also tried to put Sys.sleep(2) after analizePair, but it do not solve
the
problem.

How to force knitr/R to wait until plot is generated and put before
starting next section (next iteration of for loop) ?

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