Sent from my phone. Please excuse my brevity.
On April 1, 2016 5:01:12 PM PDT, Duncan Murdoch <murdoch.duncan at gmail.com> wrote:
>On 01/04/2016 6:46 PM, Bert Gunter wrote:
>> ... of course, whether one **should** get them is questionable...
>
>They're just statistics. How could it hurt to look at them?
>
>Duncan Murdoch
>
>>
>>
>http://www.nature.com/news/statisticians-issue-warning-over-misuse-of-p-values-1.19503#/ref-link-1
>>
>>
>> Cheers,
>> Bert
>>
>>
>>
>> Bert Gunter
>>
>> "The trouble with having an open mind is that people keep coming
>along
>> and sticking things into it."
>> -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )
>>
>>
>> On Fri, Apr 1, 2016 at 3:26 PM, Duncan Murdoch
><murdoch.duncan at gmail.com> wrote:
>>> On 01/04/2016 6:14 PM, John Sorkin wrote:
>>>> How can I get the p values from a glm ? I want to get the p values
>so I
>>>> can add them to a custom report
>>>>
>>>>
>>>> fitwean<-
>>>> glm(data[,"JWean"]~data[,"Group"],data=data,family=binomial(link
>="logit"))
>>>> summary(fitwean) # This lists the coefficeints, SEs,
>z and p
>>>> values, but I can't isolate the pvalues.
>>>> names(summary(fitwean)) # I see the coefficients, but not the p
>values
>>>> names(fitmens) # p values are not found here.
>>>
>>> Doesn't summary(fitwean) give a matrix? Then it's
>>> colnames(summary(fitwean)$coefficients) you want, not
>names(fitwean).
>>>
>>> Duncan Murdoch
>>>
>>> P.S. If you had given a reproducible example, I'd try it myself.
>>>
>>>
>>>
>>>>
>>>> Thank you!
>>>> John
>>>>
>>>> John David Sorkin M.D., Ph.D.
>>>> Professor of Medicine
>>>> Chief, Biostatistics and Informatics
>>>> University of Maryland School of Medicine Division of Gerontology
>and
>>>> Geriatric Medicine
>>>> Baltimore VA Medical Center
>>>> 10 North Greene Street
>>>> GRECC (BT/18/GR)
>>>> Baltimore, MD 21201-1524
>>>> (Phone) 410-605-7119
>>>> (Fax) 410-605-7913 (Please call phone number above prior to faxing)
>>>>
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>>>
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>
>______________________________________________
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