Reading word by word in a dataset
On Thu, 4 Nov 2004, John wrote:
Dear Andy, Why does my 'read.table()' NOT work in this example? I have the error, "subscript out of bounds", as you see below. My R version is 1.9.0.
^^^^^ That is your problem. It works in the current version of R, 2.0.0. Using colClasses=NULL was not documented in 1.9.0, and was not intended to work. What does the posting guide say about this?
system("more mtx.ex.1")
i1-apple 10$ New_York i2-banana 5$ London i3-strawberry 7$ Japan
read.table("mtx.ex.1",
colClasses=c("character","NULL","NULL"), fill=T)
Error in data[[i]] : subscript out of bounds
read.table("mtx.ex.1", colClasses=c("character",
NULL, NULL), fill=T)
V1 V2 V3
1 i1-apple 10$ New_York
2 i2-banana 5$ London
3 i3-strawberry 7$ Japan
read.table("mtx.ex.1", colClasses=c("character",
NULL, NULL), fill=T)[,1] [1] "i1-apple" "i2-banana" "i3-strawberry"
Cheers, John --- "Liaw, Andy" <andy_liaw at merck.com> wrote:
Don't give up on read.table() just yet:
read.table("clipboard", colClasses=c("character",
"NULL", "NULL"),
fill=TRUE)
V1
1 i1-apple
2 i2-banana
3 i3-strawberry
Andy
From: Spencer Graves
Uwe and Andy's solutions are great for many
applications but won't
work if not all rows have the same numbers of
fields. Consider for
example the following modification of Lee's
example:
i1-apple 10$ New_York
i2-banana
i3-strawberry 7$ Japan
If I copy this to "clipboard" and run Andy's
code, I get the
following:
> read.table("clipboard",
colClasses=c("character", "NULL", "NULL"))
Error in scan(file = file, what = what, sep = sep,
quote =
quote, dec =
dec, :
line 2 did not have 3 elements
We can get around this using "scan", then
splitting
things apart similar to the way Uwe described:
> dat <-
+ scan("clipboard", character(0), sep="\n")
Read 3 items
> dash <- regexpr("-", dat)
> dat2 <- substring(dat, pmax(0, dash)+1)
>
> blank <- regexpr(" ", dat2)
> if(any(blank<0))
+ blank[blank<0] <- nchar(dat2[blank<0])
> substring(dat2, 1, blank)
[1] "apple " "banana" "strawberry "
hope this helps. spencer graves
Uwe Ligges wrote:
Liaw, Andy wrote:
Using R-2.0.0 on WinXPPro, cut-and-pasting the
data you have:
read.table("clipboard",
colClasses=c("character", "NULL", "NULL"))
V1
1 i1-apple
2 i2-banana
3 i3-strawberry
... and if only the words after "-" are of
interest, the
statement can
be followed by sapply(strsplit(...., "-"), "[", 2) Uwe Ligges
HTH, Andy
From: j lee Hello All, I'd like to read first words in lines into a
new file.
If I have a data file the following, how can I
get the
first words: apple, banana, strawberry? i1-apple 10$ New_York i2-banana 5$ London i3-strawberry 7$ Japan Is there any similar question already posted
to the
list? I am a bit new to R, having a few months
of
experience now. Cheers, John
Brian D. Ripley, ripley at stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44 1865 272595