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puzzling results from logistic regression

Michael <comtech.usa <at> gmail.com> writes:
I have a feeling you meant to say

data <- data.frame(y=rep(c(0,1), each=100), x=1:200)

instead. 

Try 

with(data,plot(y~x))

for each data set to see what you actually got as opposed to
what you thought you were getting it.

You may still have a little bit of a problem fitting such an
extreme data set -- this is what is called "complete separation",
and leads to an infinite estimate of the slope -- if you want
to pursue this, take a look at the brglm package.