Message-ID: <4DAD9787.7080109@statistik.tu-dortmund.de>
Date: 2011-04-19T14:09:11Z
From: Uwe Ligges
Subject: How to get the tuning parameter lamda in storey's qvalue package
In-Reply-To: <2BFCFAA288534CA683028CD2DABC5207@XbiT>
Just load the package and type
qvalue
so you will see what the underlying R code is. You will find some parts
of the code may be worth to be improved, hence time to contribute to the
package.
Uwe Ligges
On 19.04.2011 07:53, Chee Chen wrote:
> Dear All,
> In Storey's estimator of the proportion of true nulls, the estimator depends on the tuning parameter lamda.
> Suppose now that an estimator of this proportion has been obtained by the qvalue package, what is the lamda that
> corresponds to the estimate? How to get this lamda?
> Thanks,
> -Chee
>
> [[alternative HTML version deleted]]
>
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