generalized mixed model + mcmcsamp
Hi Thomas/Ben, This model ca be MCMCed using MCMCglmm by specifying "multinomial2" (i.e. binomial) in the family argument. MCMCglmm by default, fits a residual in the linear model to soak up extra-binomial variation, which is similar in motivation to quasi models. Cheers, Jarrod Hi, I have fitted a generalized linear mixed effects model using lmer (library lme4), and the family = quasibinomial. I have tried to obtain a MCMC sample, but on calling mcmcsamp(model1, 1000) I get the following error which I don't understand at all: Error in .local(object, n, verbose, ...) : Update not yet written traceback() delivers: 4: .Call(mer_MCMCsamp, ans, object) 3: .local(object, n, verbose, ...) 2: mcmcsamp(model1, n = 1000, verbose = FALSE) 1: mcmcsamp(model1, n = 1000, verbose = FALSE) which again doesn't particularly help me. R is 2.8.1 under Windows, lme4 clean installed just today. Before the model is fitted I just read in data, and transform some variables. No other library is loaded. Any ideas ? thanks, Thomas
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