Message-ID: <81A41707-EE32-499D-BE8A-71138BE5DF27@tethysbio.com>
Date: 2011-11-30T17:57:36Z
From: UyenThao Nguyen
Subject: install "multtest" and "preprocessCore" packages in Bioconductor library
In-Reply-To: <CAJxcB8nCGZw95BmkZi=F1OirR9+cu1uQtojbehrV_U+yVoY+eQ@mail.gmail.com>
Hi All,
I've tried to install these "multtest" and "preprocessCore" packages in Mac, but kept getting error messages. I tried to load the packages using 2 ways:
1. Installed from BioConductor (sources)
2. And installed from BioConductor (binaries)
Both ways, I got these error messages:
For preprocessCore:
ld: warning: directory '/usr/local/lib' following -L not found
ld: library not found for -lgfortran
collect2: ld returned 1 exit status
make: *** [preprocessCore.so] Error 1
ERROR: compilation failed for package ?preprocessCore?
* removing ?/Library/Frameworks/R.framework/Versions/2.10/Resources/library/preprocessCore?
* restoring previous ?/Library/Frameworks/R.framework/Versions/2.10/Resources/library/preprocessCore?
For multtest:
ld: warning: directory '/usr/local/lib' following -L not found
** arch - x86_64
Looks like the error got to do with L drive, which I don't know how to fix it. Please help. Any suggestions will be greatly appreciated.
Thank you very much,
Nguyen