update.formula() to add interaction terms
Is this the sort of thing you are looking for?
> fm <- y ~ x1 + x2 + x3 + log(x4)
> # Use terms() instead of just all.vars() to keep log(x4) as log(x4)
> xVars <- with(attributes(terms(fm)), as.list(variables)[-c(1,response+1)])
> str(xVars)
List of 4
$ : symbol x1
$ : symbol x2
$ : symbol x3
$ : language log(x4)
> # use bquote to make the addition to the formula
> update(fm, bquote( ~ . + .(xVars[[1]]) * .(xVars[[length(xVars)]])))
y ~ x1 + x2 + x3 + log(x4) + x1:log(x4)
As a function it would be
addInteraction <- function(formula){
xVars <- with(attributes(terms(formula)), as.list(variables)[-c(1,response+1)])
update(formula, bquote( ~ . + .(xVars[[1]]) * .(xVars[[length(xVars)]])))
}
used as
> addInteraction(y~x1+x2+sqrt(x3))
y ~ x1 + x2 + sqrt(x3) + x1:sqrt(x3)
If the last 'term' in the formula is a compound like x4:x5 and you
want x1:x4:x5 added you will need to do more work (look at the
'factors' attribute of terms()'s output) - currently it adds x1:x5.
Bill Dunlap
TIBCO Software
wdunlap tibco.com
-----Original Message----- From: r-help-bounces at r-project.org [mailto:r-help-bounces at r-project.org] On Behalf Of Marie-Pierre Sylvestre Sent: Monday, February 03, 2014 12:54 PM To: r-help at r-project.org Subject: [R] update.formula() to add interaction terms Hi, I have a list of formulae that I need to modify. For each formula, I need to add an interaction term between the first independent variable and the last one. I want to write a function to achieve that because the list of formulae to modify is long. For example, if the formula is y ~ x1 + x2 + x3 + x4, then I need to turn it either into y ~ x1*x4 + x2 + x3 or y ~ x1 + x2 + x3 + x4 + x4:x1 (I know they are the same, but one may be easier to work with than the other). Suppose I have the formula a which is defined as a <- formula(y ~ x1+x2+x3+x4) I know how to access to the first and last independent variables of my formula: firstvar <- all.vars(a[[3]])[1] lastvar <- all.vars(a[[3]])[length( all.vars(a[[3]]))] What I can't figure out is how to use update.formula() to include my interaction term in order to get y ~ x1+x2+x3+x4 + x1:x4. Specifically, update.formula(a, ~ . + paste(all.vars(a[[3]])[1],firstvar, lastvar, sep = ':')) is not producing y ~ x1+x2+x3+x4 + x1:x4. Any idea? Thanks in advance, MP [[alternative HTML version deleted]]
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