NAMESPACE and imports
Please don't hijack a thread... start a new one with a new subject.
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Sent from my phone. Please excuse my brevity.
Santosh <santosh2005 at gmail.com> wrote:
Dear Rxperts, I am trying to use pdflatex from Hmisc, I get the error message. "pdflatex is not available"... The version of R is
version
platform i386-w64-mingw32 arch i386 os mingw32 system i386, mingw32 status major 2 minor 15.2 year 2012 month 10 day 26 svn rev 61015 language R version.string R version 2.15.2 (2012-10-26) nickname Trick or Treat
Is it not available anymore? I created a latex file using "tables" package and am unable to create the pdf file ... Any suggestions welcome! Thanks, Santosh On Fri, Apr 19, 2013 at 11:30 AM, Prof Brian Ripley <ripley at stats.ox.ac.uk>wrote:
On 19/04/2013 19:16, Frank Harrell wrote:
Now I see it. S3method() wants two arguments so I need to create
multiple
S3method() statements for each generic.
Sort of. It actually accepts two or three arguments: see package
'tools'
for an example of using three. Frank
Frank Harrell wrote
Right, I should have said import(Hmisc) instead of
importFrom(Hmisc), but
that does not explain the error message. Blaser Nello wrote
Not sure this fixes your problem, but as far as I can know (and
can tell
from the manual:
http://cran.r-project.org/doc/**manuals/r-release/R-exts.pdf<http://cran.r-project.org/doc/manuals/r-release/R-exts.pdf>),
importFrom needs to know what functions you are importing [e.g.
importFrom(Hmisc,
"latex") importFrom(stats, "anova")]. -----Original Message----- From:
r-help-bounces@
[mailto:
r-help-bounces@
] On Behalf Of Frank Harrell
Sent: Freitag, 19. April 2013 16:26 To:
r-help@
Subject: [R] NAMESPACE and imports
I am cleaning up the rms package to not export functions not to be called directly by users. rms uses generic functions defined in other packages. For example there is a latex method in the Hmisc package, and rms
has a
latex method for objects of class "anova.rms" so there are
anova.rms and
latex.anova.rms functions in rms. I use: export(asis,bj,bjplot,bootBCa,**bootcov,bootplot,bplot,** calibrate,cph,catg,**combineRelatedPredictors,** confplot,contrast,coxphFit,**cph,cr.setup,datadist,** effective.df,fastbw,formatNP,**gendata,gIndex,GiniMd,Glm,Gls,** groupkm,Hazard,hazard.ratio.**plot,histdensity,"%ia%",ie.** setup,interactions.containing,**legend.nomabbrev,lm.pfit,lrm,** lrtest,lsp,matinv,matrx,**Newlabels,Newlevels,nomogram,** num.intercepts,ols,ols.**influence,oos.loglik,pantext,** Penalty.matrix,Penalty.setup,**pentrace,perimeter,perlcode,** plot.xmean.ordinaly,pol,pphsm,**predab.resample,Predict,psm,** rcs,related.predictors,**reVector,robcov,Rq,sascode,** scored,sensuc,setPb,show.**influence,specs,strat,Surv,"[.** Surv",survdiffplot,survest,**Survival,survplot,univarLR,** validate,val.prob,val.probg,**val.surv,vif,which.influence) importFrom(Hmisc) S3method(anova, rms) S3method(latex, anova.rms, bj, cph, Glm, Gls, lrm, naprint.delete,
ols,
pphsm, psm, rms, Rq, summary.rms, validate)
When doing R CMD INSTALL I get: [using R 2.15.3]
** preparing package for lazy loading
Error : c("bad 'S3method' directive: S3method(latex, anova.rms,
bj, cph,
Glm, Gls, lrm, naprint.delete, ", "bad 'S3method' directive:
ols,
pphsm, psm, rms, Rq, summary.rms, validate)") ERROR: lazy loading failed for package ?rms? Any advice appreciated. Frank ----- Frank Harrell Department of Biostatistics, Vanderbilt University -- View this message in context:
http://r.789695.n4.nabble.com/**NAMESPACE-and-imports-**tp4664718.html<http://r.789695.n4.nabble.com/NAMESPACE-and-imports-tp4664718.html>
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______________________________**________________
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https://stat.ethz.ch/mailman/**listinfo/r-help<https://stat.ethz.ch/mailman/listinfo/r-help> PLEASE do read the posting guide http://www.R-project.org/**posting-guide.html<http://www.R-project.org/posting-guide.html> and provide commented, minimal, self-contained, reproducible code. ______________________________**________________ R-help@ mailing list https://stat.ethz.ch/mailman/**listinfo/r-help<https://stat.ethz.ch/mailman/listinfo/r-help> PLEASE do read the posting guide http://www.R-project.org/**posting-guide.html<http://www.R-project.org/posting-guide.html> and provide commented, minimal, self-contained, reproducible code. ----- Frank Harrell Department of Biostatistics, Vanderbilt University -- View this message in context: http://r.789695.n4.nabble.com/** NAMESPACE-and-imports-**tp4664718p4664744.html<http://r.789695.n4.nabble.com/NAMESPACE-and-imports-tp4664718p4664744.html> Sent from the R help mailing list archive at Nabble.com. ______________________________**________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/**listinfo/r-help<https://stat.ethz.ch/mailman/listinfo/r-help> PLEASE do read the posting guide http://www.R-project.org/** posting-guide.html <http://www.R-project.org/posting-guide.html> and provide commented, minimal, self-contained, reproducible code. -- Brian D. Ripley, ripley at stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~**ripley/<http://www.stats.ox.ac.uk/~ripley/> University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44 1865 272595 ______________________________**________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/**listinfo/r-help<https://stat.ethz.ch/mailman/listinfo/r-help> PLEASE do read the posting guide http://www.R-project.org/** posting-guide.html <http://www.R-project.org/posting-guide.html> and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] ------------------------------------------------------------------------ ______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.