One pdf file with plots and text output
ONKELINX, Thierry wrote:
I use Sweave for this kind of purposes.
I was thinking about Sweave as well, but I don't understand how I can
use it.
Let's say I have a source file, which defines a function
DoGrowthAll <- function()
{
pdf("GrowthAll.pdf", height=11, width=8, paper="a4")
sink("GrowthAll.txt")
try(
{
plot(x.lm)
summary(xlm)
.
.
.
}
)
sink()
dev.off()
system("xpdf ./GrowthAll.pdf", wait=FALSE)
}
Now how can I use Sweave to create this report?
Rainer
HTH, Thierry ------------------------------------------------------------------------ ---- ir. Thierry Onkelinx Instituut voor natuur- en bosonderzoek / Research Institute for Nature and Forest Cel biometrie, methodologie en kwaliteitszorg / Section biometrics, methodology and quality assurance Gaverstraat 4 9500 Geraardsbergen Belgium tel. + 32 54/436 185 Thierry.Onkelinx at inbo.be www.inbo.be Do not put your faith in what statistics say until you have carefully considered what they do not say. ~William W. Watt A statistical analysis, properly conducted, is a delicate dissection of uncertainties, a surgery of suppositions. ~M.J.Moroney
-----Oorspronkelijk bericht----- Van: r-help-bounces at r-project.org [mailto:r-help-bounces at r-project.org] Namens Rainer M Krug Verzonden: woensdag 17 oktober 2007 11:02 Aan: Prof Brian Ripley CC: r-help Onderwerp: Re: [R] One pdf file with plots and text output Prof Brian Ripley wrote:
On Wed, 17 Oct 2007, Rainer M Krug wrote:
Hi I create one pdf file with plots via pdf() and one text file with text via sink() that works very nice. But I would prefer
to have one
pdf file with plots and the text which I store in the
te=xt file via sink(). I.e.
x.lm<-lm(...) pdf() plot(x.lm) NOW THE TEXT OF summary(xlm) IN THE PDF FILE dev.off() Is this possible or is there a different format which I could use?
You can easily post-process the files to obtain a single
file. Going
from text to pdf involves many arbitrary choices, but a good text processor will help you make those and incorporate pdf figures: I would use pdflatex, but there are many other tools to do the job.
Thanks for pointing out the post-processing route (I have done similar script based pdf creations via pdflatex before), but I would like to have something only for me to make it easier to read the results. It does not need to be nicely layouted - just the text in the pdf in whatever font would be fine.
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______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.