Windows 7 R (32/64bit) running under cygwin: package not found
Probably because when you run it from Cygwin the R_LIBS variable does not point to the user and install library directories. I don't know how Rgui knows where they are (registry?) but you can look in the .Library and .Library.site variables to see the results.
In a case like this, posting your sessionInfo() for each case is highly recommended.
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Aldi Kraja <aldi at wustl.edu> wrote:
Hi, Using R 2.15.1 on Windows 7. Have installed both versions 32 and 64bit. In both of them among others I have installed a package rgenoud When I open R gui of 32bit and write library(rgenoud) it responds by showing a functional rgenoud version 5.7-8. The same it does on Rgui 64bit. Now I am working in cygwin (v. 1.12.4.0) with xwin. Normally before when I had installed a package, I only had to call the library with the name of the package and R will find the right one to load. Now when I apply R CMD BATCH script1.R out1.txt, under cygwin the first thing it reports: R version 2.15.1 (2012-06-22) -- "Roasted Marshmallows" After some generalities it reports
library(rgenoud)
Error in library(rgenoud) : there is no package called 'rgenoud' Execution halted So my question is why under cygwin in a batch mode, it does not find the installed package, which is already installed in my laptop's R? Thank you in advance, Aldi
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