Hello,
I am trying to load a fast file with the package 'openPrimeR'. The
manual (
https://www.bioconductor.org/packages/release/bioc/vignettes/openPrimeR/inst/doc/openPrimeR_vignette.html
)
says to use:
```
fasta.file <- system.file("extdata", "IMGT_data", "templates",
"Homo_sapiens_IGH_functional_exon.fasta", package =
"openPrimeR")
# Load the template sequences from 'fasta.file'
seq.df.simple <- read_templates(fasta.file)
```
but if I give these commands to a local file:
```
fasta.file <- system.file("extdata", "IMGT_data", "templates",
"stx.fa", package = "openPrimeR")
fasta.file <- system.file("stx.fa", package = "openPrimeR")
```
where stx.fa il the file I wanted to open and that is present in the
working directly. I get only an empty object.
What am I getting wrong?
Thank you
--
Best regards,
Luigi