Hi,
I am trying to install RSQLite package on my Fedora workstation. I
tried to install other packages as well, but each time I got the same
error messages saying "compilation error" and "non zero exit status".
Do I have to specify "lib="? I never specified the library path before
when I was using Fedora Core 6.
Warning in install.packages("RSQLite") : argument 'lib' is missing:
using '/usr/lib/R/library'
--- Please select a CRAN mirror for use in this session ---
Loading Tcl/Tk interface ... done
trying URL 'http://cran.cnr.Berkeley.edu/src/contrib/RSQLite_0.5-6.tar.gz'
Content type 'application/x-gzip' length 710241 bytes
opened URL
==================================================
downloaded 693Kb
gcc -std=gnu99 -shared -L/usr/local/lib -o RSQLite.so RS-DBI.o
RS-SQLite.o sqlite-all.o -L/usr/lib/R/lib -lR
/usr/bin/ld: skipping incompatible /usr/lib/R/lib/libR.so when
searching for -lR
/usr/bin/ld: cannot find -lR
collect2: ld returned 1 exit status
make: *** [RSQLite.so] Error 1
chmod: cannot access `/usr/lib/R/library/RSQLite/libs/*': No such file
or directory
ERROR: compilation failed for package 'RSQLite'
** Removing '/usr/lib/R/library/RSQLite'
The downloaded packages are in
/tmp/RtmpHQ5Y7C/downloaded_packages
Warning message:
installation of package 'RSQLite' had non-zero exit status in:
install.packages("RSQLite")
I appreciate your help.....
Thank you very much
Taka
Problem in installing packages on linux machine...
3 messages · Henrique Dallazuanna, Takatsugu Kobayashi
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Hi, Still got the same error message. I did "su R" when I got the error message for the first time. I have never seen this error message..... I will be googling for solutions as well... Thank you. Quoting Henrique Dallazuanna <wwwhsd at gmail.com>:
Hi, try install packages whit 'sudo'. $sudo R -- Henrique Dallazuanna Curitiba-Paran?-Brasil 25? 25' 40" S 49? 16' 22" O On 08/09/2007, tkobayas at indiana.edu <tkobayas at indiana.edu> wrote:
Hi,
I am trying to install RSQLite package on my Fedora workstation. I
tried to install other packages as well, but each time I got the same
error messages saying "compilation error" and "non zero exit status".
Do I have to specify "lib="? I never specified the library path before
when I was using Fedora Core 6.
Warning in install.packages("RSQLite") : argument 'lib' is missing:
using '/usr/lib/R/library'
--- Please select a CRAN mirror for use in this session ---
Loading Tcl/Tk interface ... done
trying URL 'http://cran.cnr.Berkeley.edu/src/contrib/RSQLite_0.5-6.tar.gz'
Content type 'application/x-gzip' length 710241 bytes
opened URL
==================================================
downloaded 693Kb
gcc -std=gnu99 -shared -L/usr/local/lib -o RSQLite.so RS-DBI.o
RS-SQLite.o sqlite-all.o -L/usr/lib/R/lib -lR
/usr/bin/ld: skipping incompatible /usr/lib/R/lib/libR.so when
searching for -lR
/usr/bin/ld: cannot find -lR
collect2: ld returned 1 exit status
make: *** [RSQLite.so] Error 1
chmod: cannot access `/usr/lib/R/library/RSQLite/libs/*': No such file
or directory
ERROR: compilation failed for package 'RSQLite'
** Removing '/usr/lib/R/library/RSQLite'
The downloaded packages are in
/tmp/RtmpHQ5Y7C/downloaded_packages
Warning message:
installation of package 'RSQLite' had non-zero exit status in:
install.packages("RSQLite")
I appreciate your help.....
Thank you very much
Taka
______________________________________________ R-help at stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
------------------------------------ Takatsugu Kobayashi PhD Student Indiana University, Dept. Geography