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Anyone successfully install Rgraphviz on windows with R 2.13?
4 messages · Michael Conklin, Paul Murrell, Gabor Grothendieck
Hi In addition to getting the graphviz version EXACTLY right (as per the README file), and ensuring that the right paths are set up, I also seemed to need to install graphviz in a path WITHOUT spaces (but that may just have been superstition) Paul
On 20/05/2011 8:28 a.m., Michael Conklin wrote:
I have been trying to get Rgraphviz to work (I know it is from Bioconductor) unsuccessfully. Since I have no experience with Bioconductor I thought I would ask here if anyone has advice. I have installed Graphviz 2.20.3 as is recommended on the Bioconductor site but basically R cannot seem to find the needed dll files. So, even though I have added the appropriate directories to the system path R cannot seem to find them. Any tips would be appreciated. W. Michael Conklin Chief Methodologist Google Voice: (612) 56STATS MarketTools, Inc. | www.markettools.com<http://www.markettools.com> 6465 Wayzata Blvd | Suite 170 | St. Louis Park, MN 55426. PHONE: 952.417.4719 | CELL: 612.201.8978 This email and attachment(s) may contain confidential and/or proprietary information and is intended only for the intended addressee(s) or its authorized agent(s). Any disclosure, printing, copying or use of such information is strictly prohibited. If this email and/or attachment(s) were received in error, please immediately notify the sender and delete all copies [[alternative HTML version deleted]]
______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Dr Paul Murrell Department of Statistics The University of Auckland Private Bag 92019 Auckland New Zealand 64 9 3737599 x85392 paul at stat.auckland.ac.nz http://www.stat.auckland.ac.nz/~paul/
On Thu, May 19, 2011 at 4:28 PM, Michael Conklin
<michael.conklin at markettools.com> wrote:
I have been trying to get Rgraphviz to work (I know it is from Bioconductor) unsuccessfully. Since I have no experience with Bioconductor I thought I would ask here if anyone has advice. I have installed Graphviz 2.20.3 as is recommended on the Bioconductor site but basically R cannot seem to find the needed dll files. ?So, even though I have added the appropriate directories to the system path R cannot seem to find them. Any tips would be appreciated.
Be sure to read the installation instructions. Unfortunately they really hid them. You have to download and detar the source package and then look at the README in it. Regarding the path, I have graphviz installed in C:\Program Files\Graphviz2.20 on my Windows Vista system yet it works so at least on Windows I don't think it matters that there are spaces in the path.
Statistics & Software Consulting GKX Group, GKX Associates Inc. tel: 1-877-GKX-GROUP email: ggrothendieck at gmail.com
Thanks to everyone who responded. The ReadMe file did the trick. It is too bad that it is so well hidden :) W. Michael Conklin Chief Methodologist Google Voice: (612) 56STATS MarketTools, Inc. | www.markettools.com 6465 Wayzata Blvd | Suite 170 |? St. Louis Park, MN 55426. ?PHONE: 952.417.4719 | CELL: 612.201.8978 ?? This email and attachment(s) may contain confidential and/or proprietary information and is intended only for the intended addressee(s) or its authorized agent(s). Any disclosure, printing, copying or use of such information is strictly prohibited. If this email and/or attachment(s) were received in error, please immediately notify the sender and delete all copies -----Original Message----- From: Gabor Grothendieck [mailto:ggrothendieck at gmail.com] Sent: Thursday, May 19, 2011 8:51 PM To: Michael Conklin Cc: R-help Subject: Re: [R] Anyone successfully install Rgraphviz on windows with R 2.13? On Thu, May 19, 2011 at 4:28 PM, Michael Conklin
<michael.conklin at markettools.com> wrote:
I have been trying to get Rgraphviz to work (I know it is from Bioconductor) unsuccessfully. Since I have no experience with Bioconductor I thought I would ask here if anyone has advice. I have installed Graphviz 2.20.3 as is recommended on the Bioconductor site but basically R cannot seem to find the needed dll files. ?So, even though I have added the appropriate directories to the system path R cannot seem to find them. Any tips would be appreciated.
Be sure to read the installation instructions. Unfortunately they really hid them. You have to download and detar the source package and then look at the README in it. Regarding the path, I have graphviz installed in C:\Program Files\Graphviz2.20 on my Windows Vista system yet it works so at least on Windows I don't think it matters that there are spaces in the path.
Statistics & Software Consulting GKX Group, GKX Associates Inc. tel: 1-877-GKX-GROUP email: ggrothendieck at gmail.com