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Mode of MCMC chain
2 messages · Patrik Waldmann, Thomas W Blackwell
Patrik - I interpret your question as "statistical mode" rather than "storage mode", etc. and I ask you to think about whether this question is even well-defined. Statistical mode, in the sense of the most frequent value, is well-defined for samples from a distribution on a discrete set, and it is well-defined for a continuous density, relative to a specified measure ... but for a SAMPLE from a continuous distribution, I think the concept of "mode" is only defined via a (parametric or non- parametric) estimate for an underlying smooth density. The exact criteria for "smooth" in this context want some careful thought, as well. So, with that as preamble, I think the answer to your question is the function density(). Others may be much more familiar with the recent statistical literature in this area than I am. - tom blackwell - u michigan medical school - ann arbor -
On Wed, 4 Jun 2003, Patrik Waldmann wrote:
are there any functions in R for estimation of the mode of a MCMC-chain? Patrik Waldmann