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gene ontology association

2 messages · AlessandroSemeria@cramont.it, Robert Gentleman

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Hello! I don't know if there is some R-package able
to associate  ontology  to a long list of UniGene Name (a txt-tab file or
an XML file), or
if the best way is a Perl script.
Some suggestion? Thanks!

A. S.
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On Mon, Dec 02, 2002 at 03:34:02PM +0100, AlessandroSemeria at cramont.it wrote:
It depends on where the UniGene names come from and whether we have
 already done a mapping (for example if they were from some commonly
 used Affymetrix chips then it would be relatively easy). If not, you
 need to do the mapping - what is easiest depends on what you know,
 for me R is usually easier than Perl for many others it goes the
 other way...but really, you need to be a bit more specific about what
 you are trying to do if you want anyone to help you.