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installing knncat package

2 messages · Jenny Edmondson, Brian Ripley

Original
Jenny Edmondson
# 
Hi all,

I am wondering if anyone has problem installing 'knncat' package. I tried to 
install using  'Rcmd INSTALL knncat_1.1.1.tar.gz', error message appeared. I 
attached the message in the end. I allso tried to install from RGui, but it 
was not listed.

Thanks in advance.

Regards, jenny



---------- Making package knncat ------------
  adding build stamp to DESCRIPTION
  making DLL ...
making com.d from com.c
making dodisc.d from dodisc.c
making donn.d from donn.c
making donnwrap.d from donnwrap.c
making dsort.d from dsort.c
making linpack.d from linpack.c
making matrix.d from matrix.c
making objective.d from objective.c
making ords.d from ords.c
making ranlib.d from ranlib.c
making utilsR.d from utilsR.c
gcc   -Ic:/R/rw1081/src/include -Wall -O2 -I . -pedantic -Wall -DUSE_R_ALLOC 
-DC
ALL_FROM_R  -c com.c -o com.o
gcc   -Ic:/R/rw1081/src/include -Wall -O2 -I . -pedantic -Wall -DUSE_R_ALLOC 
-DC
ALL_FROM_R  -c dodisc.c -o dodisc.o
gcc   -Ic:/R/rw1081/src/include -Wall -O2 -I . -pedantic -Wall -DUSE_R_ALLOC 
-DC
ALL_FROM_R  -c donn.c -o donn.o
gcc   -Ic:/R/rw1081/src/include -Wall -O2 -I . -pedantic -Wall -DUSE_R_ALLOC 
-DC
ALL_FROM_R  -c donnwrap.c -o donnwrap.o
donnwrap.c: In function `donnwrap':
donnwrap.c:84: warning: passing arg 5 of `do_nn' from incompatible pointer 
type
donnwrap.c:84: warning: passing arg 9 of `do_nn' from incompatible pointer 
type
donnwrap.c:84: warning: passing arg 10 of `do_nn' from incompatible pointer 
type

donnwrap.c:84: warning: passing arg 16 of `do_nn' from incompatible pointer 
type

donnwrap.c:84: warning: passing arg 21 of `do_nn' from incompatible pointer 
type

donnwrap.c:84: warning: passing arg 22 of `do_nn' from incompatible pointer 
type

donnwrap.c:84: warning: passing arg 23 of `do_nn' from incompatible pointer 
type

donnwrap.c:94: warning: passing arg 5 of `do_nn' from incompatible pointer 
type
donnwrap.c:94: warning: passing arg 9 of `do_nn' from incompatible pointer 
type
donnwrap.c:94: warning: passing arg 10 of `do_nn' from incompatible pointer 
type

donnwrap.c:94: warning: passing arg 16 of `do_nn' from incompatible pointer 
type

donnwrap.c:94: warning: passing arg 21 of `do_nn' from incompatible pointer 
type

donnwrap.c:94: warning: passing arg 22 of `do_nn' from incompatible pointer 
type

donnwrap.c:94: warning: passing arg 23 of `do_nn' from incompatible pointer 
type

gcc   -Ic:/R/rw1081/src/include -Wall -O2 -I . -pedantic -Wall -DUSE_R_ALLOC 
-DC
ALL_FROM_R  -c dsort.c -o dsort.o
gcc   -Ic:/R/rw1081/src/include -Wall -O2 -I . -pedantic -Wall -DUSE_R_ALLOC 
-DC
ALL_FROM_R  -c linpack.c -o linpack.o
gcc   -Ic:/R/rw1081/src/include -Wall -O2 -I . -pedantic -Wall -DUSE_R_ALLOC 
-DC
ALL_FROM_R  -c matrix.c -o matrix.o
gcc   -Ic:/R/rw1081/src/include -Wall -O2 -I . -pedantic -Wall -DUSE_R_ALLOC 
-DC
ALL_FROM_R  -c objective.c -o objective.o
gcc   -Ic:/R/rw1081/src/include -Wall -O2 -I . -pedantic -Wall -DUSE_R_ALLOC 
-DC
ALL_FROM_R  -c ords.c -o ords.o
gcc   -Ic:/R/rw1081/src/include -Wall -O2 -I . -pedantic -Wall -DUSE_R_ALLOC 
-DC
ALL_FROM_R  -c ranlib.c -o ranlib.o
gcc   -Ic:/R/rw1081/src/include -Wall -O2 -I . -pedantic -Wall -DUSE_R_ALLOC 
-DC
ALL_FROM_R  -c utilsR.c -o utilsR.o
ar cr knncat.a *.o
ranlib knncat.a
windres --include-dir c:/R/rw1081/src/include  -i knncat_res.rc -o 
knncat_res.o
gcc  --shared -s  -o knncat.dll knncat.def knncat.a knncat_res.o  
-Lc:/R/rw1081/
src/gnuwin32 c:/R/rw1081/src/modules/lapack/libRlapack.a -lRblas -lg2c -lg2c 
-lR

gcc.exe: c:/R/rw1081/src/modules/lapack/libRlapack.a: No such file or 
directory
make[2]: *** [knncat.dll] Error 1
make[1]: *** [srcDynlib] Error 2
make: *** [pkg-knncat] Error 2
*** Installation of knncat failed ***
Brian Ripley
# 
This is an error in the package.  In file src/Makevars it has

LAPACK_LIBS=$(R_HOME)/src/modules/lapack/libRlapack.a

which is a reference to the R sources.  That should not be there: please 
remove it and this may well work.

However, your version of R is rather old, which is why you are not seeing 
a pre-compiled version.   R 2.0.1 will be out this week, and please 
upgrade to it when all the current packages which compile under Windows 
will be available to you, pre-compiled.
On Mon, 15 Nov 2004, Jenny Edmondson wrote:

            

      
      
      
    

        
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-lRblas -lg2c -lg2c