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ERROR: installing package indices failed

2 messages · Sigal Blay, Uwe Ligges

#
gregmisc is installed yet the problem persist.
I installed gregmisc using 
install.packages(c("combinat","gregmisc","genetics"),lib='/home/sblay/lib')
(on the same library path where I am trying to install LDheatmap)
Package     LibPath           Version Priority Bundle    
combinat  "combinat"  "/home/sblay/lib" "0.0-5" NA       NA        
gdata     "gdata"     "/home/sblay/lib" "2.0.0" NA       "gregmisc"
genetics  "genetics"  "/home/sblay/lib" "1.1.1" NA       NA        
gmodels   "gmodels"   "/home/sblay/lib" "2.0.0" NA       "gregmisc"
gplots    "gplots"    "/home/sblay/lib" "2.0.0" NA       "gregmisc"
gtools    "gtools"    "/home/sblay/lib" "2.0.0" NA       "gregmisc"
LDheatmap "LDheatmap" "/home/sblay/lib" "1.0"   NA       NA        

...
Yes.  You do not have gdata (part of gregmisc) installed, and genetics 
depends on it.  How did you get genetics installed? A binary install?

Install gregmisc ....
#
Sigal Blay wrote:
Have you set the environment variable R_LIBS appropriately?

Uwe Ligges