Hello, Anyone who knows a fast and accurate algorithm for generating draws from an underdispersed Poisson distribution. Or even better, if there is a package containing such an implementation. Thanks Rene
Simulating underdispersed counts
3 messages · René Holst, Greg Snow, Gerard M. Keogh
Accurate probably depends on what exactly you want to accomplish with the simulation, but one simple approach would be to generate more data than you need from a regular Poisson distribution, then throw away the extreme values on both sides. -- Gregory (Greg) L. Snow Ph.D. Statistical Data Center Intermountain Healthcare greg.snow at imail.org 801.408.8111
-----Original Message----- From: r-help-bounces at r-project.org [mailto:r-help-bounces at r- project.org] On Behalf Of Ren? Holst Sent: Thursday, December 04, 2008 6:40 AM To: R-help at r-project.org Subject: [R] Simulating underdispersed counts Hello, Anyone who knows a fast and accurate algorithm for generating draws from an underdispersed Poisson distribution. Or even better, if there is a package containing such an implementation. Thanks Rene
______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html and provide commented, minimal, self-contained, reproducible code.
V interesting point Greg.
But are you not just suggesting left and right truncation?
It strikes me that if the data are Poission then a mixture is likely to be
better - something akin to zero-deflated.
Neg binomail works for greater variance == mix a gamma and poisson, but I'm
unsure what to mix to deflate the variance - maybe bernoulli.
In any event, one possibility is that the data are dependnent (e.g. family
data) so to get a underdispersion you could draw from the poisson and then
redraw from the result based on some condition such as closeness (e.g. as a
proxy for family size).
Hope this helps!
Gerard
Greg Snow
<Greg.Snow at imail.
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Sent by: Ren? Holst <rho at aqua.dtu.dk>,
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04/12/2008 17:21 Subject
Re: [R] Simulating underdispersed
counts
Accurate probably depends on what exactly you want to accomplish with the
simulation, but one simple approach would be to generate more data than you
need from a regular Poisson distribution, then throw away the extreme
values on both sides.
--
Gregory (Greg) L. Snow Ph.D.
Statistical Data Center
Intermountain Healthcare
greg.snow at imail.org
801.408.8111
-----Original Message----- From: r-help-bounces at r-project.org [mailto:r-help-bounces at r- project.org] On Behalf Of Ren? Holst Sent: Thursday, December 04, 2008 6:40 AM To: R-help at r-project.org Subject: [R] Simulating underdispersed counts Hello, Anyone who knows a fast and accurate algorithm for generating draws from an underdispersed Poisson distribution. Or even better, if there is a package containing such an implementation. Thanks Rene
______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html and provide commented, minimal, self-contained, reproducible code.
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