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how to normalize a subset of affy data using MAS5 method
2 messages · Anup Som, Martin Morgan
On 11/18/2011 02:55 AM, Anup Som wrote:
Dear all,
I was trying to normalize a subset of affy data those transcribe
are either P or M (called pm_filter). I am able to normalize pm_filter
subset by using RMA method, however MAS5 is not working.
For RMA method, I used the following commend: est<-rma(affydata,
subset=pm_filter). Could any help me; how do I do this by using MAS5
method?
Hi -- You'll get knowledgeable help on the Bioconductor mailing list; posting does not require subscription. http://bioconductor.org/help/mailing-list/ Martin
Regards, Anup Som
Computational Biology Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109 Location: M1-B861 Telephone: 206 667-2793