trouble loading ggplot2 using R

Hello, 

I have a similar error, running R in Snow Leopard too
library("ggplot2")
Error : .onAttach failed in attachNamespace() for 'ggplot2', details:
  call: stats::runif(1)
  error: .Random.seed no es un vector de n?meros enteros pero es de tipo
'list'
Error: package/namespace load failed for ?ggplot2?

does anybody have this package running in Snow Leopard?
thks in advance.

Ram?n Ovelar

--
View this message in context: http://r.789695.n4.nabble.com/trouble-loading-ggplot2-using-R-tp3332044p4583459.html
Sent from the R help mailing list archive at Nabble.com.
What is the output of your sessionInfo()? Many folks have ggplot2
running on Snow Leopard (myself included) -- most likely, you need to
update something or other...

Michael
Hello,

I have a similar error, running R in Snow Leopard too

library("ggplot2")
Error : .onAttach failed in attachNamespace() for 'ggplot2', details:
?call: stats::runif(1)
?error: .Random.seed no es un vector de n?meros enteros pero es de tipo
'list'
Error: package/namespace load failed for ?ggplot2?

does anybody have this package running in Snow Leopard?
thks in advance.

Ram?n Ovelar

--
View this message in context: http://r.789695.n4.nabble.com/trouble-loading-ggplot2-using-R-tp3332044p4583459.html
Sent from the R help mailing list archive at Nabble.com.

______________________________________________
R-help at r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Hi, thanks for the answer. 

Here is the output:
sessionInfo()
R version 2.14.1 (2011-12-22)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)

locale:
[1] C/en_US.UTF-8/C/C/C/C

attached base packages:
[1] grid      stats     graphics  grDevices utils     datasets  methods  
[8] base     

other attached packages:
[1] gplots_2.10.1     KernSmooth_2.23-7 caTools_1.12      bitops_1.0-4.1   
[5] gdata_2.8.2       gtools_2.6.2     

loaded via a namespace (and not attached):
 [1] MASS_7.3-16        RColorBrewer_1.0-5 colorspace_1.1-1  
dichromat_1.2-4   
 [5] digest_0.5.2       ggplot2_0.9.0      memoise_0.1        munsell_0.3       
 [9] plyr_1.7.1         proto_0.3-9.2      reshape2_1.2.1     scales_0.2.0      
[13] stringr_0.6        tools_2.14.1      

--
View this message in context: http://r.789695.n4.nabble.com/trouble-loading-ggplot2-using-R-tp3332044p4583568.html
Sent from the R help mailing list archive at Nabble.com.
I have a similar error, running R in Snow Leopard too

library("ggplot2")
Error : .onAttach failed in attachNamespace() for 'ggplot2', details:
?call: stats::runif(1)
?error: .Random.seed no es un vector de n?meros enteros pero es de tipo
'list'
Error: package/namespace load failed for ?ggplot2?
That's a completely different error.  Are you setting .Random.seed to
something non-standard?  That's what the error message suggests.

Hadley
Assistant Professor / Dobelman Family Junior Chair
Department of Statistics / Rice University
http://had.co.nz/
An embedded and charset-unspecified text was scrubbed...
Name: not available
URL: <https://stat.ethz.ch/pipermail/r-help/attachments/20120425/aaec1a67/attachment.pl>
I don't think I have touched at anything at all. I'm very newbie to R and to
be honest I don't know what "Ramdom.seed" is. I will try to find out.

I have seen other messages about "restoring random.seed", but in order to
check that the problem is really that I have used some "Viewing data"
commands. The error says, in Spanish, that ?".Random.seed is not an integer
vector but a list" (.Random.seed no es un vector de n?meros enteros pero es
de tipo?'list')
That's definitely not what it should look like - you might want to
start from a fresh R workspace.

Hadley
Assistant Professor / Dobelman Family Junior Chair
Department of Statistics / Rice University
http://had.co.nz/

I don't think I have touched at anything at all. I'm very newbie to  
R and
to be honest I don't know what "Ramdom.seed" is. I will try to find  
out.

I have seen other messages about "restoring random.seed", but in  
order to
check that the problem is really that I have used some "Viewing data"
commands. The error says, in Spanish, that  ".Random.seed is not an  
integer
vector but a list" (.Random.seed no es un vector de n?meros enteros  
pero es
de tipo 'list')

class(.Random.seed)
[1] "data.frame"
That _is_ a problem. It _should_ be an integer atomic vector, although  
it appears to be the correct length (at least is the same as  
my .Random.seed which has the same leading entry, 403, as yours)  and  
it appears to be all integers. Something you have done or some program  
has done has altered the default value. It is possible that this  
problem assignment has been saved in your (invisible) .Rdata file.

It is generally a bad idea to do anything to .Random.seed, but I don't  
see any harm at this point in trying this:

.Random.seed <- unlist(.Random.seed)

(... and then trying to install ggplot2)

That should get rid of the 'data.frame' attribute. I would also track  
down your .Rdata file and maybe also your .Rhistory file and delete  
them. You will need to learn how to do this in a Terminal session or  
you will need to learn how to display invisible files in Finder.app.  
The archives of the SIG-Mac list will have instructions.
David.

>> str(.Random.seed)
> 'data.frame': 626 obs. of  1 variable:
> $ .Random.seed: num  4.03e+02 1.00e+01 -1.28e+09 -1.40e+09 -1.06e 
> +09 ..
>> head(.Random.seed)
>  .Random.seed
> 1          403
> 2           10
> 3  -1282779759
> 4  -1404015037
> 5  -1062445742
> 6    665436644
>> tail(.Random.seed)
>    .Random.seed
> 621   1369617214
> 622  -1673749493
> 623  -1883947891
> 624   1445895610
> 625   -903220232
> 626    970996181
>
> On Tue, Apr 24, 2012 at 4:26 PM, Hadley Wickham <hadley at rice.edu>  
> wrote:
>
>>> I have a similar error, running R in Snow Leopard too
>>>
>>>> library("ggplot2")
>>> Error : .onAttach failed in attachNamespace() for 'ggplot2',  
>>> details:
>>> call: stats::runif(1)
>>> error: .Random.seed no es un vector de n?meros enteros pero es de  
>>> tipo
>>> 'list'
>>> Error: package/namespace load failed for ?ggplot2?
>>
>> That's a completely different error.  Are you setting .Random.seed to
>> something non-standard?  That's what the error message suggests.
>>
>> Hadley
>>
>> --
>> Assistant Professor / Dobelman Family Junior Chair
>> Department of Statistics / Rice University
>> http://had.co.nz/
>>
>
>
>
> -- 
> ==================================
> Ram?n Ovelar
>
> 	[[alternative HTML version deleted]]
>
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.

David Winsemius, MD
West Hartford, CT
Alternatively, the OP might just use set.seed(1) to get a fresh seed
rather than playing with .Random.seed directly.

To the OP: if you're on Mac, follow these instructions and we'll see
if that fixes your problem:

**) open Terminal
**) type R -q --vanilla
**) At the prompt type the following lines

set.seed(1)
install.packages("ggplot2")
library("ggplot2")
qplot(carat, price, data = head(diamonds, 200)) # Should make a nice
ggplot graph with not so many dots

**) If that works and you don't have anything important saved in your
default start up, return to Terminal and type

mv .RData .Trash

(This just puts it in the trash so we can recover it if you realize
later there actually is something important there)

**) Then start R by typing "R -q" and enter

library("ggplot2")
qplot(carat, price, data = head(diamonds, 200))

and that should work.

Hopefully that will isolate your problem. If anything fails along the
way, let us know exactly where and how.

Best,
Michael
On Apr 25, 2012, at 8:27 AM, Ramon Ovelar wrote:

I don't think I have touched at anything at all. I'm very newbie to R and
to be honest I don't know what "Ramdom.seed" is. I will try to find out.

I have seen other messages about "restoring random.seed", but in order to
check that the problem is really that I have used some "Viewing data"
commands. The error says, in Spanish, that ?".Random.seed is not an
integer
vector but a list" (.Random.seed no es un vector de n?meros enteros pero
es
de tipo 'list')

class(.Random.seed)
[1] "data.frame"

That _is_ a problem. It _should_ be an integer atomic vector, although it
appears to be the correct length (at least is the same as my .Random.seed
which has the same leading entry, 403, as yours) ?and it appears to be all
integers. Something you have done or some program has done has altered the
default value. It is possible that this problem assignment has been saved in
your (invisible) .Rdata file.

It is generally a bad idea to do anything to .Random.seed, but I don't see
any harm at this point in trying this:

.Random.seed <- unlist(.Random.seed)

(... and then trying to install ggplot2)

That should get rid of the 'data.frame' attribute. I would also track down
your .Rdata file and maybe also your .Rhistory file and delete them. You
will need to learn how to do this in a Terminal session or you will need to
learn how to display invisible files in Finder.app. The archives of the
SIG-Mac list will have instructions.

--
David.

str(.Random.seed)
'data.frame': 626 obs. of ?1 variable:
$ .Random.seed: num ?4.03e+02 1.00e+01 -1.28e+09 -1.40e+09 -1.06e+09 ..
head(.Random.seed)
?.Random.seed
1 ? ? ? ? ?403
2 ? ? ? ? ? 10
3 ?-1282779759
4 ?-1404015037
5 ?-1062445742
6 ? ?665436644
tail(.Random.seed)
? .Random.seed
621 ? 1369617214
622 ?-1673749493
623 ?-1883947891
624 ? 1445895610
625 ? -903220232
626 ? ?970996181

On Tue, Apr 24, 2012 at 4:26 PM, Hadley Wickham <hadley at rice.edu> wrote:

I have a similar error, running R in Snow Leopard too

library("ggplot2")
Error : .onAttach failed in attachNamespace() for 'ggplot2', details:
call: stats::runif(1)
error: .Random.seed no es un vector de n?meros enteros pero es de tipo
'list'
Error: package/namespace load failed for ?ggplot2?

That's a completely different error. ?Are you setting .Random.seed to
something non-standard? ?That's what the error message suggests.

Hadley

--
Assistant Professor / Dobelman Family Junior Chair
Department of Statistics / Rice University
http://had.co.nz/

--
==================================
Ram?n Ovelar

? ? ? ?[[alternative HTML version deleted]]

______________________________________________
R-help at r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

David Winsemius, MD
West Hartford, CT

______________________________________________
R-help at r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.