R CMD check doesn't stop with checking examples

One suggestion:  After you break the check process, look at the file

C:\Gregor\devel\GeneticsPed\GeneticsPed.Rcheck\GeneticsPed-Ex.R

and try to see if you can run that in batch mode.

Andy

From: Gorjanc Gregor

Hello!

I am building a package, which includes also one Fortran subroutine, 
which works fine if I compile it as a shared library and load it into
R via dyn.load(). However, when I launch R CMD check it doesn't stop 
with checking examples. It's just doing and doing ... I pasted the
whole output from R CMD check. Does anyone have any suggestions?

I'm still using R 2.0.1.

C:\Gregor\devel\GeneticsPed>Rcmd check GeneticsPed
* checking for working latex ... OK
* using log directory 'C:/Gregor/devel/GeneticsPed/GeneticsPed.Rcheck'
* checking for file 'GeneticsPed/DESCRIPTION' ... OK
* checking if this is a source package ... OK

installing R.css in C:/Gregor/devel/GeneticsPed/GeneticsPed.Rcheck


---------- Making package GeneticsPed ------------
 adding build stamp to DESCRIPTION
 installing NAMESPACE file and metadata
 making DLL ...
g77 -O2 -Wall   -c meuwissen.f -o meuwissen.o
ar cr GeneticsPed.a meuwissen.o
ranlib GeneticsPed.a
gcc  --shared -s  -o GeneticsPed.dll GeneticsPed.def 
GeneticsPed.a GeneticsPed_r
es.o  -Lc:/Programs/R/rw2001/src/gnuwin32  -lg2c -lR
 ... DLL made
 installing DLL
 installing R files
 installing man source files
 installing indices
 installing help

Building/Updating help pages for package 'GeneticsPed'

    Formats: text html latex example chm
 NAtoUnknown                       text    html    latex   example
 code.pedigree                     text    html    latex   example
 extend.pedigree                   text    html    latex   example
 generate.pedigree                 text    html    latex   example
 generation                        text    html    latex   example
 getcode.pedigree                  text    html    latex   example
 inbreeding                        text    html    latex   
example chm
 is.unknown                        text    html    latex   example
 kinship                           text    html    latex   
example chm
 pedigree                          text    html    latex   
example chm
    missing link(s):  ?pedigree in kinship?
 prop.pedigree                     text    html    latex   example
 relationshipAdditive              text    html    latex   
example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling c:\Gregor\devel\GeneticsPed\GeneticsPed\chm\GeneticsPed.chm


Compile time: 0 minutes, 0 seconds
13      Topics
41      Local links
0       Internet links
1       Graphic


Created 
c:\Gregor\devel\GeneticsPed\GeneticsPed\chm\GeneticsPed.chm, 
32,327 byte
s
Compression decreased file by 10,172 bytes.
 adding MD5 sums

* DONE (GeneticsPed)

* checking package directory ... OK
* checking for portable file names ... OK
* checking package dependencies ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for library.dynam ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking Rd files ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking for CRLF line endings in C sources/headers ... OK
* creating GeneticsPed-Ex.R ... OK
* checking examples ...

--
Lep pozdrav / With regards,
   Gregor Gorjanc

--------------------------------------------------------------
----------
University of Ljubljana
Biotechnical Faculty       URI: http://www.bfro.uni-lj.si/MR/ggorjan
Zootechnical Department    email: gregor.gorjanc <at> bfro.uni-lj.si
Groblje 3                  tel: +386 (0)1 72 17 861
SI-1230 Domzale            fax: +386 (0)1 72 17 888
Slovenia