Hi, We have been running R ver 1.4.1 on a redhat linux (7.1)cluster without problem for quit some time. Now, some user wanted me to install version 1.6.1, and it compiled fine, but it crashes with "segmentation fault" when you run it. I used gcc296 (default) for compiling, Should I change compiler or is there some other thing I could do to avoid this problem. Regards Per-Anders
R 1.6.1 segmentation fault
3 messages · Per-Anders Wernberg, David Meyer, rohan sadler
Per-Anders Wernberg wrote:
Hi, We have been running R ver 1.4.1 on a redhat linux (7.1)cluster without problem for quit some time. Now, some user wanted me to install version 1.6.1, and it compiled fine, but it crashes with "segmentation fault" when you run it. I used gcc296 (default) for compiling, Should I change compiler
yes, definitely. -d
or is there some other thing I could do to avoid this problem. Regards Per-Anders
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1 day later
Hi, I had a segmentation fault similar to the way you described, but between R 1.5.1 and R 1.6.1 on RH 7.3. All I had to do was to change the value of the environmental variables R_HOME and R_LIBS since R 1.6.1 was compiled in a different directory from R 1.5.1. I had defined these variables earlier in order to couple R with the data exploration package GGOBI, which may or may not be your case. My segmentation fault arose (from memory) primarily when trying to load a library since there were two library systems available, one from 1.5.1 and one from 1.6.1. Somebody else is likely to be more clear on this matter. Rohan
Per-Anders Wernberg wrote:
Hi, We have been running R ver 1.4.1 on a redhat linux (7.1)cluster without problem for quit some time. Now, some user wanted me to install version 1.6.1, and it compiled fine, but it crashes with "segmentation fault" when you run it. I used gcc296 (default) for compiling, Should I change compiler or is there some other thing I could do to avoid this problem. Regards Per-Anders
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