I am using MODIS Tools and am having a lot of difficulty troubleshooting my code. I am a PhD student studying African buffalo in Kruger National Park, South Africa. The study I am currently working on involves a herd of 200 African buffalo caught every six months for 4 years. I am trying to use EVI and NDVI to assess seasonal variation thus I would like mean EVI and NDVI for each observation (each time each buffalo was captured). I have capture date, lat and long for each observation. However, when using ?250m_16_days_pixel_reliability? as my quality control band I keep getting the warning message: Warning in MODISSummaries(LoadDat = period, FileSep = ",", Product = "MOD13Q1", : Only single data point that passed the quality screen: cannot summarise When using ?250m_16_days_VI_Quality? as my quality control band I keep getting the warning message: Error in QualityCheck(Data = band.time.series, QualityScores = QA.time.series, : QualityScores not all in range of MOD13Q1's QC: 0-3 I seem to get this message with all subsets of my data (I have tried running all of my data at once and then just one data point at a time). I have also tried using wider date ranges as well as wider size ranges (in case the pixel reliability is poor within a certain area or time frame) but still get the same messages.
MODISTools Help
2 messages · Caroline, Bert Gunter
This is a specialized package that fairly few of us are likely to have familiarity with, especialy when you have not followed the posting guide (below) and posted code and a reproducible example. That said, a web search on R MODIS appeared to bring up relevant hits, including a MODIS tutorial. Have you tried that? Cheers, Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Thu, Jun 22, 2017 at 2:12 PM, Caroline
<gliddeca at science.oregonstate.edu> wrote:
I am using MODIS Tools and am having a lot of difficulty troubleshooting my code.
I am a PhD student studying African buffalo in Kruger National Park, South Africa. The study I am currently working on involves a herd of 200 African buffalo caught every six months for 4 years. I am trying to use EVI and NDVI to assess seasonal variation thus I would like mean EVI and NDVI for each observation (each time each buffalo was captured). I have capture date, lat and long for each observation.
However, when using ?250m_16_days_pixel_reliability? as my quality control band I keep getting the warning message:
Warning in MODISSummaries(LoadDat = period, FileSep = ",", Product = "MOD13Q1", :
Only single data point that passed the quality screen: cannot summarise
When using ?250m_16_days_VI_Quality? as my quality control band I keep getting the warning message:
Error in QualityCheck(Data = band.time.series, QualityScores = QA.time.series, :
QualityScores not all in range of MOD13Q1's QC: 0-3
I seem to get this message with all subsets of my data (I have tried running all of my data at once and then just one data point at a time). I have also tried using wider date ranges as well as wider size ranges (in case the pixel reliability is poor within a certain area or time frame) but still get the same messages.
[[alternative HTML version deleted]]
______________________________________________ R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.