Skip to content

How to do it in R

4 messages · André Luis Neves, Leonardo Ferreira Fontenelle, jim holtman +1 more

#
Dear all,

I`ve got to calculate the ratio of methanogens to bacteria, but I wouldn`t
like to divide the total copy numbers of methanogens ( on average 10^8) by
bacteria (10^10) because they have different exponents and bases. So, my
idea is to standardize both microorganisms counts to 10^3.

Hypothetical example of what I`d like to do:

Total Methanogens: 28 x 10^3
Total bacteria: 710 x 10^3


Total: 710 + 28= 738 x 10^3

Met/bac Ratio : (28/738)*100 = 3.79%

How could I perform this calculation in R?

Thanks,
#
myfun <- function(a, b) a/(a + b)

Leonardo Ferreira Fontenelle

Em Sex 24 jun. 2016, ?s 13:05, Andr? Luis Neves escreveu:
#
pretty simple:
[1] 3.794038


Jim Holtman
Data Munger Guru

What is the problem that you are trying to solve?
Tell me what you want to do, not how you want to do it.

On Fri, Jun 24, 2016 at 12:05 PM, Andr? Luis Neves <andrluis at ualberta.ca>
wrote:

  
  
#
This is very basic. Have you gone through any R tutorials? There are
many good ones on the web. e.g., see here:
https://www.rstudio.com/online-learning/#R

In any case, you should not expect this list to teach you basic R. You
*should* expect it to help you learn and improve your own efforts. I
realize that there is a gray area where these things may overlap.

Also see inline below.

Cheers,
Bert

Bert Gunter

"The trouble with having an open mind is that people keep coming along
and sticking things into it."
-- Opus (aka Berkeley Breathed in his "Bloom County" comic strip )
On Fri, Jun 24, 2016 at 9:05 AM, Andr? Luis Neves <andrluis at ualberta.ca> wrote:
Why can't you use scientific notation? What form are your data in?

e.g.
[1] 0.01148148