An embedded and charset-unspecified text was scrubbed... Name: not available URL: <https://stat.ethz.ch/pipermail/r-help/attachments/20110414/19b5079e/attachment.pl>
nesting multiple for loops
3 messages · PIKAL Petr, Ben Hunter
Hi r-help-bounces at r-project.org napsal dne 15.04.2011 01:34:22:
Hi everyone. I am quite frustrated that this doesn't work, as all the functions
within
work fine by themselves. I'd also like any pointers to how to avoid
'for'
loops in my code. I understand it's less than desirable, but I'm still
quite
new and use them a lot. I have a few wide datasets (90 to 120) with long column names, each name contains a number of different 'markers'. Each could be considered a
factor
variable within the column name. Their are two categories of factors,
we'll
call them f1 and f2.
The data frame names look something like this:
'ace_van' , 'boy_van', 'car_xes' , 'ace_xes', 'dog_wall' , 'car_zounds'
f1 <- c('ace', 'boy', 'car', 'dog')
f2 <- c('van', 'wall', 'xes', 'zounds') # actual vectors are length 6
and
7, so I don't want to individually sum the 42 combinations.
var.table <- function(data, vec1, vec2)
{
table <- as.data.frame(matrix(nrow = length(vec1), ncol =
length(vec2)),
row.names = vec1)
names(table) <- vec2
for (i in 1:length(vec1))
{
for (j in 1:length(vec2))
{
indices <- intersect(grep(vec1[j], names(data), value = TRUE),
grep(cats[i], names(data), value = TRUE))
table[i,j] <- sum(data[ ,indices])
}
}
table
}
var.table(mydf, f1, f2)
Output: Error in FUN(X[[1L]], ...) : only defined on a data frame with all numeric variables Every entry in mydf is an integer with no missing values.
I can not provide solution as I can not decipher what you want to do but here are few comments. Do not use names of functions for naming objects e.g. table, it can be quite confusing. What is cats?? Are you sure that mydf values are numbers? What does str(mydf) say? Do I understand that you want summarise all values in columns of data frame that have some common name? lapply(f2, grep, names(mydf)) will give you list of indices of columns in mydf matching particular f2 item. From this you can continue. Maybe plyr package can also be used. Regards Petr
Thanks a ton. -Ben [[alternative HTML version deleted]]
______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
An embedded and charset-unspecified text was scrubbed... Name: not available URL: <https://stat.ethz.ch/pipermail/r-help/attachments/20110415/c99c74ff/attachment.pl>