Dear Group Members, Forgive me if I am a little bit out of subject. I am looking for a good way to test the homogeneity of two variance-covariance matrices using R, prior to a Hotelling T² test. You’ll probably tell me that it is better to use a robust version of T², but I have no precise idea of the statistical behaviour of my variables, because they are parameters from the harmonics of Fourier series used to describe the outlines of specimens. I rather like to explore precisely these harmonics parameters. It is known that Box’s M-test of homogeneity of variance-covariance matrices is oversensitive to heteroscedasticity and to deviation from multivariate normality and that it I not useful (Everitt, 2005 ; Seber, 1984 ; Layard, 1974). I have tried a “quick and dirty†intuitive comparison between two covariance matrices and I am seeking the opinion of professional statisticians about this stuff. The idea is to compare the two matrices using the absolute value of their difference, then to make a quadratic form using a unity vector and its transpose. One obtain a scalar that must be close to zero if the two covariance matrices are homogeneous : Let S1 and S2 be two variance-covariance matrices of dimension n, Let a be a vector of n ones : a <- rep(1, times = n) b = a’ * |S1 – S2| * a, i.e. in R: b <- a %*% abs(S1 – S2) %*% a Is b distributed following a chi-square distribution? Is this idea total crap? Did someone tried this before and published something? My data gave two 77 x 77 covariance matrices and b = 0.003243, a value close to 0, hence I expect my two covariance matrices are homogeneous. Am I right? If this comparison is incorrect, could someone suggest a useful way to make this comparison using R? Thank you in advance for your comments. Franck _______________________________ Dr Franck BAMEUL Le Clos d'Ornon 7 rue FrÂédÂéric Mistral F-33140 VILLENAVE D'ORNON France fbameul at wanadoo.fr 06 89 88 16 73 (personnel) 05 57 19 57 20 (professionnel) 05 57 19 57 27 (fax)
How to test homogeneity of covariance matrices?
1 message · Franck Bameul