Is there a way to get columns out of a filematrix using the column name
directly in the same way that you can with a regular matrix?
library(filematrix)
M<-t(matrix(1:3,3,4))
colnames(M)<-c("one","two", "three")
M
#Extract column
M[,1]
M[,"one"]
M[,c(1,3)]
M[,c("one","three")]
FM<-fm.create.from.matrix(filenamebase = "test",mat = M)
FM[,1]
colnames(FM)
#extract by column by name does not work
FM[,"one"]
#workaround using grep
#is there a more direct way of doing this to retrieve more than one column?
FM[,grep("one",colnames(FM))]
FM[,c(grep("one",colnames(FM)),grep("three",colnames(FM)))]
many thanks for any suggestions
Nevil Amos
Return filematrix column by column names instead of column index?
2 messages · Nevil Amos, Jim Lemon
Hi Nevil,
As I don't have the filematrix package this is really an "any suggestion":
FM[,which(colnames(FM) %in% c("one","three"))]
Jim
On Tue, Sep 8, 2020 at 9:43 PM nevil amos <nevil.amos at gmail.com> wrote:
Is there a way to get columns out of a filematrix using the column name
directly in the same way that you can with a regular matrix?
library(filematrix)
M<-t(matrix(1:3,3,4))
colnames(M)<-c("one","two", "three")
M
#Extract column
M[,1]
M[,"one"]
M[,c(1,3)]
M[,c("one","three")]
FM<-fm.create.from.matrix(filenamebase = "test",mat = M)
FM[,1]
colnames(FM)
#extract by column by name does not work
FM[,"one"]
#workaround using grep
#is there a more direct way of doing this to retrieve more than one column?
FM[,grep("one",colnames(FM))]
FM[,c(grep("one",colnames(FM)),grep("three",colnames(FM)))]
many thanks for any suggestions
Nevil Amos
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