Hello,
is there any function in the package snow to check for a really running
cluster?
The function checkCluster only checks the variable cl. And the variable is
still available after stopping the cluster!
( a simple solution would be deleting the cluster variable cl in the function
stopCluster)
library(snow)
cl <- makeCluster(5)
5 slaves are spawned successfully. 0 failed.
clusterApply(cl, 1:2, get("+"), 3)
clusterApply(cl, 1:2, get("+"), 3)
Fehler in mpi.probe(source, tag, comm, status) :
MPI_Error_string: invalid communicator
R version 2.6.0 (2007-10-03)
x86_64-unknown-linux-gnu
locale:
LC_CTYPE=de_DE.UTF-8;LC_NUMERIC=C;LC_TIME=de_DE.UTF-8;LC_COLLATE=de_DE.UTF-8;LC_MONETARY=de_DE.UTF-8;LC_MESSAGES=de_DE.UTF-8;LC_PAPER=de_DE.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=de_DE.UTF-8;LC_IDENTIFICATION=C
attached base packages:
[1] tools stats graphics grDevices utils datasets methods [8]
base
other attached packages:
[1] affyPara_0.99.2 affy_1.16.0 preprocessCore_1.0.0
[4] affyio_1.6.1 Biobase_1.16.1 Rmpi_0.5-5 [7]
snow_0.2-9
loaded via a namespace (and not attached):
[1] rcompgen_0.1-15
Best
Markus