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ROCR package not installing
6 messages · Mohammed Ouassou, Philip Robinson, Pascal Oettli
Hello, What is the version of R you use ? Regards, Pascal Le 22/11/2012 15:02, Philip Robinson a ?crit :
I have tried installing the package (ROCR) with this command:
Install.packages(ROCR)
And with this command on the command line
R CMD INSTALL ROCR_1.0-4.tar.gz
But both times I get exactly the same error shown below, I don't understand
what is wrong, is this an error in the package code?
Thank you
Philip
probinson at bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ R CMD INSTALL
ROCR_1.0-4.tar.gz
* installing to library
'/home/probinson/R/x86_64-pc-linux-gnu-library/2.10'
* installing *source* package 'ROCR' ...
** R
** data
** demo
** preparing package for lazy loading
Loading required package: gtools
Loading required package: gdata
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.
gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
Attaching package: 'gdata'
The following object(s) are masked from package:utils :
object.size
Loading required package: caTools
Loading required package: bitops
Loading required package: grid
Loading required package: KernSmooth
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
Attaching package: 'gplots'
The following object(s) are masked from package:stats :
lowess
Error in setMethod("plot", signature(x = "performance", y = "missing"), :
no existing definition for function "plot"
Error : unable to load R code in package 'ROCR'
ERROR: lazy loading failed for package 'ROCR'
* removing '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR'
probinson at bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$
[[alternative HTML version deleted]]
______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
try:
install.packages("ROCR",dep=T)
M.O
On to., 2012-11-22 at 16:02 +1000, Philip Robinson wrote:
I have tried installing the package (ROCR) with this command:
Install.packages(ROCR)
And with this command on the command line
R CMD INSTALL ROCR_1.0-4.tar.gz
But both times I get exactly the same error shown below, I don't understand
what is wrong, is this an error in the package code?
Thank you
Philip
probinson at bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ R CMD INSTALL
ROCR_1.0-4.tar.gz
* installing to library
'/home/probinson/R/x86_64-pc-linux-gnu-library/2.10'
* installing *source* package 'ROCR' ...
** R
** data
** demo
** preparing package for lazy loading
Loading required package: gtools
Loading required package: gdata
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.
gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
Attaching package: 'gdata'
The following object(s) are masked from package:utils :
object.size
Loading required package: caTools
Loading required package: bitops
Loading required package: grid
Loading required package: KernSmooth
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
Attaching package: 'gplots'
The following object(s) are masked from package:stats :
lowess
Error in setMethod("plot", signature(x = "performance", y = "missing"), :
no existing definition for function "plot"
Error : unable to load R code in package 'ROCR'
ERROR: lazy loading failed for package 'ROCR'
* removing '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR'
probinson at bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$
[[alternative HTML version deleted]]
______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
My version is: Linux bioinform08 2.6.32-33-generic #70-Ubuntu SMP Thu Jul 7 21:13:52 UTC 2011 x86_64 GNU/Linux Ubuntu 10.04.3 LTS R version 2.10.1 (2009-12-14) Philip -----Original Message----- From: Pascal Oettli [mailto:kridox at ymail.com] Sent: Thursday, 22 November 2012 4:20 PM To: Philip Robinson Cc: r-help at r-project.org Subject: Re: [R] ROCR package not installing Hello, What is the version of R you use ? Regards, Pascal Le 22/11/2012 15:02, Philip Robinson a ?crit :
I have tried installing the package (ROCR) with this command:
Install.packages(ROCR)
And with this command on the command line
R CMD INSTALL ROCR_1.0-4.tar.gz
But both times I get exactly the same error shown below, I don't
understand what is wrong, is this an error in the package code?
Thank you
Philip
probinson at bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ R CMD
INSTALL ROCR_1.0-4.tar.gz
* installing to library
'/home/probinson/R/x86_64-pc-linux-gnu-library/2.10'
* installing *source* package 'ROCR' ...
** R
** data
** demo
** preparing package for lazy loading
Loading required package: gtools
Loading required package: gdata
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.
gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
Attaching package: 'gdata'
The following object(s) are masked from package:utils :
object.size
Loading required package: caTools
Loading required package: bitops
Loading required package: grid
Loading required package: KernSmooth
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
Attaching package: 'gplots'
The following object(s) are masked from package:stats :
lowess
Error in setMethod("plot", signature(x = "performance", y = "missing"), :
no existing definition for function "plot"
Error : unable to load R code in package 'ROCR'
ERROR: lazy loading failed for package 'ROCR'
* removing '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR'
probinson at bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$
[[alternative HTML version deleted]]
______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Hi Mohammed,
This didn't work either:
Error in setMethod("plot", signature(x = "performance", y = "missing"), :
no existing definition for function "plot"
Error : unable to load R code in package 'ROCR'
ERROR: lazy loading failed for package ?ROCR?
* removing ?/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR?
The downloaded packages are in
?/tmp/Rtmpn1DjHt/downloaded_packages?
Warning message:
In install.packages("ROCR", dep = T) :
installation of package 'ROCR' had non-zero exit status
thanks
Philip
-----Original Message-----
From: Mohammed Ouassou [mailto:mohammed.ouassou at statkart.no]
Sent: Thursday, 22 November 2012 6:02 PM
To: Philip Robinson
Cc: r-help at r-project.org
Subject: Re: [R] ROCR package not installing
try:
install.packages("ROCR",dep=T)
M.O
On to., 2012-11-22 at 16:02 +1000, Philip Robinson wrote:
I have tried installing the package (ROCR) with this command:
Install.packages(ROCR)
And with this command on the command line
R CMD INSTALL ROCR_1.0-4.tar.gz
But both times I get exactly the same error shown below, I don't
understand what is wrong, is this an error in the package code?
Thank you
Philip
probinson at bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ R CMD
INSTALL ROCR_1.0-4.tar.gz
* installing to library
'/home/probinson/R/x86_64-pc-linux-gnu-library/2.10'
* installing *source* package 'ROCR' ...
** R
** data
** demo
** preparing package for lazy loading
Loading required package: gtools
Loading required package: gdata
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.
gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
Attaching package: 'gdata'
The following object(s) are masked from package:utils :
object.size
Loading required package: caTools
Loading required package: bitops
Loading required package: grid
Loading required package: KernSmooth
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
Attaching package: 'gplots'
The following object(s) are masked from package:stats :
lowess
Error in setMethod("plot", signature(x = "performance", y = "missing"), :
no existing definition for function "plot"
Error : unable to load R code in package 'ROCR'
ERROR: lazy loading failed for package 'ROCR'
* removing '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR'
probinson at bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$
[[alternative HTML version deleted]]
______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Very old version. Maybe you should try again after upgrading your version of R (current is 2.15.2). Pascal Le 22/11/2012 18:11, Philip Robinson a ?crit :
My version is: Linux bioinform08 2.6.32-33-generic #70-Ubuntu SMP Thu Jul 7 21:13:52 UTC 2011 x86_64 GNU/Linux Ubuntu 10.04.3 LTS R version 2.10.1 (2009-12-14) Philip -----Original Message----- From: Pascal Oettli [mailto:kridox at ymail.com] Sent: Thursday, 22 November 2012 4:20 PM To: Philip Robinson Cc: r-help at r-project.org Subject: Re: [R] ROCR package not installing Hello, What is the version of R you use ? Regards, Pascal Le 22/11/2012 15:02, Philip Robinson a ?crit :
I have tried installing the package (ROCR) with this command:
Install.packages(ROCR)
And with this command on the command line
R CMD INSTALL ROCR_1.0-4.tar.gz
But both times I get exactly the same error shown below, I don't
understand what is wrong, is this an error in the package code?
Thank you
Philip
probinson at bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$ R CMD
INSTALL ROCR_1.0-4.tar.gz
* installing to library
'/home/probinson/R/x86_64-pc-linux-gnu-library/2.10'
* installing *source* package 'ROCR' ...
** R
** data
** demo
** preparing package for lazy loading
Loading required package: gtools
Loading required package: gdata
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.
gdata: read.xls support for 'XLSX' (Excel 2007+) files ENABLED.
Attaching package: 'gdata'
The following object(s) are masked from package:utils :
object.size
Loading required package: caTools
Loading required package: bitops
Loading required package: grid
Loading required package: KernSmooth
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
Attaching package: 'gplots'
The following object(s) are masked from package:stats :
lowess
Error in setMethod("plot", signature(x = "performance", y = "missing"), :
no existing definition for function "plot"
Error : unable to load R code in package 'ROCR'
ERROR: lazy loading failed for package 'ROCR'
* removing '/home/probinson/R/x86_64-pc-linux-gnu-library/2.10/ROCR'
probinson at bioinform08:/tmp/RtmpO0rFbx/downloaded_packages$
[[alternative HTML version deleted]]
______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.