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How to avoid test for NAs in foreign function call

2 messages · Knut M. Wittkowski, Tony Plate

#
We have packed logical vectors into integers, 32 flags at a time and 
then want to AND or OR these vectors of "integers" using other C functions.

The problem: occasionally, the packed sequence of 32 logical values 
resembles NA, causing the error message:

Error in bitAND(packed1, packed2, lenx) :
         NAs in foreign function call (arg 1)

How does one instruct R to avoid checking for NAs?

Knut M. Wittkowski, PhD,DSc
------------------------------------------
The Rockefeller University,
Center for Clinical and Translational Science
Research Design and Biostatistics,
1230 York Ave #121B, Box 322, NY,NY 10021
+1(212)327-7175, +1(212)327-8450 (Fax), kmw at rockefeller.edu
http://www.rockefeller.edu/ccts/rdbs.php
#
Supply NAOK=TRUE argument to .C; the help page for .C() contains the 
following:

Usage
                 .C(name, ..., NAOK = FALSE, DUP = TRUE, PACKAGE)

Also, you might want to consider using the "raw" data type instead of 
integers -- that way you should have fewer problems with R code making 
unwanted interpretations of certain bit patterns.

-- Tony Plate
Knut M. Wittkowski wrote: