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lme4 package installation

7 messages · aurora.gonzalez at openmailbox.org, Thierry Onkelinx, Teck Kiang Tan +3 more

#
Hello

I've downloaded the tar.gz file of the package "lme4" and when I use the 
coomand:

install.packages("lme4_1.1-8.tar.gz", repos = NULL, type = "source")

appears an error that suspends the installation:


In file included from external.cpp:8:0:
predModule.h:12:23: fatal error: RcppEigen.h: No such file or directory
compilation terminated.
make: *** [external.o] Error 1
ERROR: compilation failed for package ?lme4?
* removing ?/home/aurora/R/x86_64-pc-linux-gnu-library/3.2/lme4?



Does anyone know how to fix it? Thank you very much!


My sessionInfo:


R version 3.2.1 (2015-06-18)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu precise (12.04.5 LTS)

locale:
  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8
  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C
  [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods
[7] base

loaded via a namespace (and not attached):
[1] tools_3.2.1
#
Have you trying installing it directly from CRAN?

install.packages("lme4")

Do you have all dependencies installed? install.packages() from CRAN will
take care of that. You repos = NULL you have to install all dependencies
manually.

ir. Thierry Onkelinx
Instituut voor natuur- en bosonderzoek / Research Institute for Nature and
Forest
team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance
Kliniekstraat 25
1070 Anderlecht
Belgium

To call in the statistician after the experiment is done may be no more
than asking him to perform a post-mortem examination: he may be able to say
what the experiment died of. ~ Sir Ronald Aylmer Fisher
The plural of anecdote is not data. ~ Roger Brinner
The combination of some data and an aching desire for an answer does not
ensure that a reasonable answer can be extracted from a given body of data.
~ John Tukey

2015-08-13 16:13 GMT+02:00 <aurora.gonzalez at openmailbox.org>:

  
  
#
Hi all

I have problem in installation lme4 and have tried over the past 2 days. It
failed to install from the various countries.
Warning: unable to access index for repository
http://cran.stat.nus.edu.sg/src/contrib
Warning: unable to access index for repository
http://www.stats.ox.ac.uk/pub/RWin/src/contrib
Warning: unable to access index for repository
http://cran.stat.nus.edu.sg/bin/windows/contrib/3.2

Warning message:
package ?lme4? is not available (for R version 3.2.1)

Teck Kiang


On Thu, Aug 13, 2015 at 11:09 PM, Thierry Onkelinx <thierry.onkelinx at inbo.be

  
  
#
On 13.08.2015 22:52, Teck Kiang Tan wrote:
This mirror does not respond whn I just tried, choose another one.
This one works for me (but does not contain lme4).
Perhaps also run setInternet2() before you try again in cae you need 
proxy settings.

Best,
Uwe Ligges
#
Thanks Uwe Ligges for the suggestion.
I tried using setInternet2() but also failed.
I tried for several other countries but also failed.
Any other suggestion to overcome it.
Thanks.


Warning: unable to access index for repository
http://cran.utstat.utoronto.ca/src/contrib
Warning: unable to access index for repository
http://www.stats.ox.ac.uk/pub/RWin/src/contrib
Warning: unable to access index for repository
http://cran.utstat.utoronto.ca/bin/windows/contrib/3.2
Warning: unable to access index for repository
http://www.stats.ox.ac.uk/pub/RWin/bin/windows/contrib/3.2


On Fri, Aug 14, 2015 at 1:29 PM, Uwe Ligges <ligges at statistik.tu-dortmund.de

  
  
2 days later
#
Hi

try tu put line

setInternet2(TRUE)

into your Rprofile.site file (located in etc directory of R installation) and restart R.


Cheers
Petr
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#
You may well need to specify the utils library, as follows, to make sure the setInternet2 function is found at run time: 

utils::setInternet2()



S Ellison



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