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summary of the effects after logistic regression model
2 messages · andrea evangelista, Frank E Harrell Jr
andrea evangelista wrote:
Dear all, my aim is to estimate the efficacy over time of a treatment for
headache prevention. Data consist of long sequences of repeated binary
outcomes (1 if the subject has at least 1 episode of headache , 0
otherwise) on subjects randomized to placebo or treatment.
I have fit a logistic regression model with Huber-White cluster sandwich
covariance estimator.
I have put in the model the variables treatment (trt),sex,age and a
restricted cubic spline of time (days) to allow for non-linear treatment
effects.
I use the functions lrm and robcov from R Design library:
h<-lrm(head ~ trt*rcs(days)+ age+ sex,x=T,y=T)
h.rob<-robcov(h,id)
I want to estimate treatment effect over time, then:
k<-contrast(h.rob,list(day=1:240, trt=1),
list(day=1:240, trt=0))
xYplot(Cbind(exp(Contrast), exp(Lower),exp( Upper)) ~ day, data=k) #Plot
of treatment effects (odds ratio).
The treatment group has a disavantage at the baseline ( for day=1 ,OR=1.16),
however at day=210 I can see a reduction of headache risk (OR=0.58) on
treatment group.
How can I set to 1 the OR of treatment at the baseline (day=1) with R? In
case, is it corrent?
I don't know of an extremely simple way to do it. But the baseline may be noisy and I'm not sure I would recommend doing what you want. Frank Harrell
Best regards Andrea Evangelista Italy [[alternative HTML version deleted]]
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