nlme() should be able to do this. Harold -----Original Message----- From: r-help-bounces at stat.math.ethz.ch [mailto:r-help-bounces at stat.math.ethz.ch]On Behalf Of Bill Shipley Sent: Monday, April 26, 2004 1:00 PM To: R help list Subject: [R] mixed model with binomial link? Hello. I have to fit a mixed model from a repeated measures split-plot experiment in which the response variable is binary. This requires a generalised linear mixed model in which I can specify a binomial distribution. I can't find the appropriate package in R. I have looked at glmmML, but it doesn't seem to allow any mixed structure beyond a simple 2-level one. Can anyone point me to the appropriate package, so that I don't have to go to SAS? Thanks. Bill Shipley Subject Matter Editor, Ecology North American Editor, Annals of Botany D??partement de biologie, Universit?? de Sherbrooke, Sherbrooke (Qu??bec) J1K 2R1 CANADA Bill.Shipley at USherbrooke.ca <http://callisto.si.usherb.ca:8080/bshipley/> http://callisto.si.usherb.ca:8080/bshipley/ ______________________________________________ R-help at stat.math.ethz.ch mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
mixed model with binomial link?
3 messages · Harold Doran, Douglas Bates, A.J. Rossini
"Harold Doran" <HaroldD at ccsso.org> writes:
nlme() should be able to do this.
I think it would be better to use GLMM from the lme4 package for this.
Nope. nlme != glmm's. Though it makes for a first (or half)-order approximation, sometimes. best, -tony "Harold Doran" <HaroldD at ccsso.org> writes:
nlme() should be able to do this. Harold -----Original Message----- From: r-help-bounces at stat.math.ethz.ch [mailto:r-help-bounces at stat.math.ethz.ch]On Behalf Of Bill Shipley Sent: Monday, April 26, 2004 1:00 PM To: R help list Subject: [R] mixed model with binomial link? Hello. I have to fit a mixed model from a repeated measures split-plot experiment in which the response variable is binary. This requires a generalised linear mixed model in which I can specify a binomial distribution. I can't find the appropriate package in R. I have looked at glmmML, but it doesn't seem to allow any mixed structure beyond a simple 2-level one. Can anyone point me to the appropriate package, so that I don't have to go to SAS? Thanks. Bill Shipley Subject Matter Editor, Ecology North American Editor, Annals of Botany D??partement de biologie, Universit?? de Sherbrooke, Sherbrooke (Qu??bec) J1K 2R1 CANADA Bill.Shipley at USherbrooke.ca <http://callisto.si.usherb.ca:8080/bshipley/> http://callisto.si.usherb.ca:8080/bshipley/ [[alternative HTML version deleted]]
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