Hello, this is a quite specific topic, but I just wonder if there are some R packages present for 'probe design'. tnx, Kurt.
All art is but imitation of nature. -- Lucius Annaeus Seneca
probe design
4 messages · Laurent Gautier, Kurt Sys, Henrik Bengtsson
On Fri, Jun 13, 2003 at 03:56:47PM +0200, Kurt Sys wrote:
Hello, this is a quite specific topic, but I just wonder if there are some R packages present for 'probe design'. tnx, Kurt. -- All art is but imitation of nature. -- Lucius Annaeus Seneca
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What do you mean by "probe design" ? Are you referring to microarrays ?
-------------------------------------------------------------- currently at the National Yang-Ming University in Taipei, Taiwan -------------------------------------------------------------- Laurent Gautier CBS, Building 208, DTU PhD. Student DK-2800 Lyngby,Denmark tel: +45 45 25 24 89 http://www.cbs.dtu.dk/laurent
2 days later
-- Mail from Laurent Gautier sent on Friday June 13 2003 at 17:29 (GMT+0200):
On Fri, Jun 13, 2003 at 03:56:47PM +0200, Kurt Sys wrote:
> Hello, > > this is a quite specific topic, but I just wonder if there are > some R packages present for 'probe design'. > > tnx, Kurt. > What do you mean by "probe design" ? Are you referring to microarrays ? Yes, that's what I mean, but actually it doesn't matter a lot. Probes can be used different molecular techniques, can't they? My second question would 've been: are there any packages for microarray design, supposing I have a list of possible probes (with appropriate melting temperatures etc) for each organism or group of organisms. Kurt.
Hi, I think the mailing list at Bioconductor (http://www.bioconductor.org/) is a good place to ask as there you will find the right people. A lot are on this list too, but not all. Have a nice day! Henrik Bengtsson Lund University, Sweden
-----Original Message----- From: r-help-bounces at stat.math.ethz.ch [mailto:r-help-bounces at stat.math.ethz.ch] On Behalf Of Kurt Sys Sent: den 16 juni 2003 09:20 To: r-help at stat.math.ethz.ch Subject: Re: [R] probe design -- Mail from Laurent Gautier sent on Friday June 13 2003 at 17:29 (GMT+0200): On Fri, Jun 13, 2003 at 03:56:47PM +0200, Kurt Sys wrote:
> Hello, > > this is a quite specific topic, but I just wonder if there are > some R packages present for 'probe design'. > > tnx, Kurt. >
What do you mean by "probe design" ? Are you referring to microarrays ? Yes, that's what I mean, but actually it doesn't matter a lot. Probes can be used different molecular techniques, can't they? My second question would 've been: are there any packages for microarray design, supposing I have a list of possible probes (with appropriate melting temperatures etc) for each organism or group of organisms. Kurt.
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