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Problems installing GRASS package

2 messages · Paul English, Brian Ripley

Original
Paul English
# 
Hi,
	I'm running R 2.0 installed from the source port on FreeBSd 4.10
and I'm having trouble installing the GRASS package. Following is the
procedure plus errors:
<download snipped>
downloaded 186Kb

* Installing *source* package 'GRASS' ...
** libs
cc -I/usr/local/lib/R/include -DR_GRASS_INTERFACE -I./include
-I/usr/local/include -mieee-fp  -fPIC  -O -pipe -c R_G_init.c -o
R_G_init.o
cc -I/usr/local/lib/R/include -DR_GRASS_INTERFACE -I./include
-I/usr/local/include -mieee-fp  -fPIC  -O -pipe -c adj_cellhd.c -o
adj_cellhd.o
cc -I/usr/local/lib/R/include -DR_GRASS_INTERFACE -I./include
-I/usr/local/include -mieee-fp  -fPIC  -O -pipe -c alloc.c -o alloc.o
cc -I/usr/local/lib/R/include -DR_GRASS_INTERFACE -I./include
-I/usr/local/include -mieee-fp  -fPIC  -O -pipe -c alloc_cell.c -o
alloc_cell.o
cc -I/usr/local/lib/R/include -DR_GRASS_INTERFACE -I./include
-I/usr/local/include -mieee-fp  -fPIC  -O -pipe -c ascii_chk.c -o
ascii_chk.o
cc -I/usr/local/lib/R/include -DR_GRASS_INTERFACE -I./include
-I/usr/local/include -mieee-fp  -fPIC  -O -pipe -c auto_mask.c -o
auto_mask.o
In file included from include/G.h:3,
                 from auto_mask.c:18:
include/rpc/types.h:87: redefinition of `caddr_t'
/usr/include/sys/types.h:69: `caddr_t' previously declared here
include/rpc/types.h:89: redefinition of `u_int'
/usr/include/sys/types.h:54: `u_int' previously declared here
include/rpc/types.h:90: redefinition of `u_long'
/usr/include/sys/types.h:55: `u_long' previously declared here
include/rpc/types.h:91: redefinition of `u_short'
/usr/include/sys/types.h:53: `u_short' previously declared here
*** Error code 1

Stop in /tmp/R.INSTALL.35187/GRASS/src.
ERROR: compilation failed for package 'GRASS'
** Removing '/usr/local/lib/R/library/GRASS'
** Restoring previous '/usr/local/lib/R/library/GRASS'

Delete downloaded files (y/N)?
The packages are in /tmp/RtmpaUoyEh/Rinstdir446b9b3d
Warning message:
Installation of package GRASS had non-zero exit status in:
install.packages("GRASS")

Thanks,
Paul
Brian Ripley
# 
Please send such problems, with solution, to the package maintainers.

They do not occur generally and seem to be due to the system headers on 
your particular system.  Only users of `FreeBSd' will be able to 
troubleshoot, i.e. you.

In this particular case, I think the package needs to use its own headers
only if the system ones are not available (via a configure test), and
suggest you try deleting GRASS/src/include/rpc.  (Roger: the zlib.h and
zconf.h are also worrying, as they might mismatch the libz used.)
On Wed, 27 Oct 2004, Paul English wrote:

            

      
      
      
    

        
There is no R 2.0 and no `source port'.  There are sources of R 2.0.0.