Dear List-Members, does anyone know a simple way to automatically install all R packages on a unix system to the default library path? Not from inside R, it should rather work as a shell script - job at startup. Something like R cmd install -l pkgs ### where pkgs should mean all packages (is there an option to control overwriting?) Thanks a lot, N. Boehme
Installation of all packages under Unix
3 messages · nboehme at uni-potsdam.de, Paul Hiemstra, Bernardo Rangel Tura
nboehme at uni-potsdam.de schreef:
Dear List-Members, does anyone know a simple way to automatically install all R packages on a unix system to the default library path? Not from inside R, it should rather work as a shell script - job at startup. Something like R cmd install -l pkgs ### where pkgs should mean all packages (is there an option to control overwriting?) Thanks a lot, N. Boehme
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Hi, To get a lot of packages (not all), install the "ctv" package (Cran Task Views) and run: library(ctv) install.views(available.views()) This will install all the packages that are part of a Cran Task View, a sizeable amount. A question: why would you want to install all R pacakges. It is not very likely that you are going to use them all. cheers, Paul
Drs. Paul Hiemstra Department of Physical Geography Faculty of Geosciences University of Utrecht Heidelberglaan 2 P.O. Box 80.115 3508 TC Utrecht Phone: +3130 274 3113 Mon-Tue Phone: +3130 253 5773 Wed-Fri http://intamap.geo.uu.nl/~paul
On Thu, 2009-04-02 at 14:37 +0200, nboehme at uni-potsdam.de wrote:
Dear List-Members, does anyone know a simple way to automatically install all R packages on a unix system to the default library path? Not from inside R, it should rather work as a shell script - job at startup. Something like R cmd install -l pkgs ### where pkgs should mean all packages (is there an option to control overwriting?) Thanks a lot, N. Boehme
All packages in CRAN install.packages(new.packages(),dep=T,clean=T)
Bernardo Rangel Tura, M.D,MPH,Ph.D National Institute of Cardiology Brazil